Os06g0202400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0202400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.99 | 0.428 | 9.58 | 1.13 | 1.31 | 1.49 | 0.534 | 1.8 | -1.29 | 0.769 | 20.2 | 5187 | -- | -- |
| 85.44 | 0.431 | 9.66 | 0.926 | 1.32 | 1.13 | 0.595 | -- | -1.38 | 0.725 | 21 | 5131 | -- | -- |
| 84.2 | 0.427 | 9.58 | 1.11 | 1.3 | 1.5 | -- | 1.85 | -1.29 | 0.781 | 20.22 | 5207 | -- | -- |
| 86.78 | 0.434 | 9.65 | 0.905 | 1.31 | 1.07 | -- | -- | -1.37 | 0.715 | 21.07 | 5116 | -- | -- |
| 189.88 | 0.642 | 9.55 | 1.11 | -- | 1.76 | -- | 2.26 | -1.3 | -- | 20.26 | 5258 | -- | -- |
| 108 | 0.487 | 9.58 | 1.59 | 1.36 | -- | 0.582 | -- | -1.03 | 0.741 | -- | -- | -- | -- |
| 109.44 | 0.49 | 9.58 | 1.57 | 1.35 | -- | -- | -- | -1.03 | 0.759 | -- | -- | -- | -- |
| 192.84 | 0.647 | 9.68 | 0.809 | -- | 1.18 | -- | -- | -1.41 | -- | 21.17 | 3842 | -- | -- |
| 94.87 | 0.454 | 9.69 | -- | 1.33 | 1.48 | -- | -- | -1.51 | 0.794 | 19.97 | 20628 | -- | -- |
| 224.09 | 0.699 | 9.55 | 1.62 | -- | -- | -- | -- | -1 | -- | -- | -- | -- | -- |
| 174.11 | 0.617 | 9.62 | -- | 1.38 | -- | -- | -- | -1.2 | 0.811 | -- | -- | -- | -- |
| 203 | 0.664 | 9.69 | -- | -- | 1.45 | -- | -- | -1.59 | -- | 19.77 | 47520 | -- | -- |
| 292.92 | 0.799 | 9.59 | -- | -- | -- | -- | -- | -1.18 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 83.15 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 2 | 83.27 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 83.31 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 5 | 83.45 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 4 |
| 6 | 83.52 | wind | 1 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 10 | 83.87 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 41 | 84.26 | temperature | 20 | 14400 | < th | dose dependent | sin | 2 | NA |
| 43 | 84.27 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 10 |
| 80 | 84.45 | wind | 1 | 14400 | < th | dose independent | rect. | 23 | 5 |
| 86 | 84.47 | temperature | 20 | 14400 | < th | dose dependent | rect. | 15 | 20 |
| 116 | 84.54 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 131 | 84.59 | temperature | 20 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 136 | 84.61 | temperature | 20 | 14400 | < th | dose dependent | rect. | 19 | 23 |
| 201 | 84.84 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 17 |
| 204 | 84.86 | temperature | 20 | 4320 | > th | dose independent | rect. | 2 | 2 |
| 209 | 84.88 | temperature | 20 | 4320 | < th | dose independent | rect. | 3 | 1 |
| 215 | 84.90 | radiation | 10 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 227 | 84.93 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 15 |
| 232 | 84.94 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 13 |
| 262 | 85.00 | radiation | 10 | 4320 | > th | dose independent | rect. | 16 | 2 |
| 285 | 85.01 | temperature | 20 | 14400 | < th | dose dependent | sin | 15 | NA |
| 288 | 85.02 | temperature | 20 | 4320 | > th | dose independent | sin | 8 | NA |
| 374 | 85.13 | temperature | 20 | 4320 | < th | dose independent | sin | 7 | NA |
| 388 | 85.14 | temperature | 20 | 4320 | > th | dose independent | rect. | 7 | 23 |
| 460 | 85.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 23 |
| 495 | 85.26 | temperature | 20 | 4320 | > th | dose independent | no | NA | NA |
| 510 | 85.27 | temperature | 20 | 4320 | > th | dose independent | rect. | 2 | 23 |
| 519 | 85.28 | temperature | 20 | 4320 | > th | dose independent | rect. | 11 | 23 |
| 590 | 85.35 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 23 |
| 612 | 85.37 | temperature | 20 | 4320 | < th | dose independent | rect. | 7 | 23 |
| 648 | 85.42 | temperature | 20 | 14400 | < th | dose independent | rect. | 5 | 13 |
| 670 | 85.44 | temperature | 20 | 4320 | < th | dose independent | rect. | 2 | 23 |
| 689 | 85.46 | temperature | 20 | 4320 | < th | dose independent | no | NA | NA |
| 715 | 85.49 | temperature | 20 | 4320 | < th | dose independent | rect. | 11 | 23 |
| 744 | 85.53 | temperature | 20 | 4320 | < th | dose independent | rect. | 23 | 5 |
| 774 | 85.57 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 786 | 85.59 | wind | 1 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 821 | 85.63 | temperature | 20 | 14400 | > th | dose independent | rect. | 5 | 13 |
| 829 | 85.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 10 |
| 972 | 85.83 | temperature | 20 | 14400 | < th | dose independent | rect. | 17 | 1 |