Os06g0200700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0200700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 409.12 | 0.95 | 3.33 | 1.05 | 0.872 | -0.862 | 3.37 | -4.99 | 0.0704 | 20.5 | 0.2966 | 4478 | -- | -- |
| 412.99 | 0.947 | 3.38 | 1.12 | 0.898 | -1.4 | 2.97 | -- | 0.0775 | 20.3 | 0.3302 | 2260 | -- | -- |
| 445.24 | 0.983 | 3.32 | 0.989 | 0.872 | -0.856 | -- | -4.88 | 0.0886 | 20.2 | 0.001036 | 4479 | -- | -- |
| 443.21 | 0.981 | 3.37 | 0.938 | 0.795 | -1.68 | -- | -- | 0.0987 | 20 | 0.5 | 1941 | -- | -- |
| 486.24 | 1.03 | 3.31 | 0.943 | -- | -0.866 | -- | -4.76 | 0.063 | -- | 0.063 | 4700 | -- | -- |
| 443.5 | 0.987 | 3.4 | 1.47 | 0.861 | -- | 3.31 | -- | -0.0033 | 20.6 | -- | -- | -- | -- |
| 478.86 | 1.02 | 3.4 | 1.37 | 0.864 | -- | -- | -- | -0.00161 | 20.3 | -- | -- | -- | -- |
| 480.1 | 1.02 | 3.35 | 0.871 | -- | -1.8 | -- | -- | 0.0915 | -- | 0.2983 | 1941 | -- | -- |
| 461.71 | 1 | 3.39 | -- | 0.826 | -2.03 | -- | -- | 0.0353 | 20.1 | 0.4999 | 2140 | -- | -- |
| 520.16 | 1.07 | 3.38 | 1.36 | -- | -- | -- | -- | -0.0111 | -- | -- | -- | -- | -- |
| 528.23 | 1.08 | 3.43 | -- | 0.857 | -- | -- | -- | -0.154 | 20.4 | -- | -- | -- | -- |
| 497.34 | 1.04 | 3.37 | -- | -- | -2.24 | -- | -- | 0.0333 | -- | 0.2326 | 1952 | -- | -- |
| 569.16 | 1.11 | 3.41 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 398.64 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 3 | 399.77 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 4 | 400.00 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 3 |
| 7 | 400.68 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 21 | 402.38 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 22 | 402.60 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 23 | 402.67 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 6 |
| 28 | 403.18 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 6 |
| 30 | 403.24 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 34 | 403.53 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 15 | 8 |
| 36 | 403.63 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 37 | 403.66 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 15 | 8 |
| 39 | 403.80 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 43 | 403.86 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 16 | 1 |
| 63 | 404.19 | atmosphere | 995.0 | 43200 | < th | dose independent | rect. | 10 | 5 |
| 74 | 404.40 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 76 | 404.47 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 15 | 8 |
| 79 | 404.60 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 15 |
| 80 | 404.60 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 15 |
| 81 | 404.61 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 14 |
| 83 | 404.61 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 86 | 404.65 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 87 | 404.65 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 89 | 404.68 | atmosphere | 995.0 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 90 | 404.69 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 12 | 2 |
| 99 | 404.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 19 | 6 |
| 103 | 404.92 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 10 | 5 |
| 104 | 404.94 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 110 | 405.00 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 9 |
| 116 | 405.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 118 | 405.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 9 |
| 177 | 405.62 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 3 |
| 188 | 405.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 220 | 405.91 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 222 | 405.91 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 3 |
| 251 | 406.04 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 274 | 406.11 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 14 | NA |
| 279 | 406.12 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 14 | NA |
| 280 | 406.12 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 2 | 1 |
| 281 | 406.12 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 14 | NA |
| 306 | 406.24 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 11 |
| 308 | 406.24 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 11 |
| 320 | 406.29 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 21 |
| 327 | 406.33 | atmosphere | 1000.0 | 43200 | < th | dose dependent | sin | 11 | NA |
| 336 | 406.37 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 11 |
| 410 | 406.64 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 12 |
| 419 | 406.68 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 13 | 12 |
| 423 | 406.68 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 13 | 12 |
| 463 | 406.80 | atmosphere | 1000.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 599 | 407.24 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 18 |
| 705 | 407.49 | atmosphere | 995.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 758 | 407.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 759 | 407.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 785 | 407.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 813 | 407.74 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 822 | 407.76 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 20 | 21 |
| 825 | 407.76 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 20 | 21 |
| 848 | 407.83 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 857 | 407.84 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 20 | 21 |
| 912 | 407.99 | atmosphere | 1000.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 913 | 407.99 | atmosphere | 1000.0 | 43200 | < th | dose independent | sin | 10 | NA |
| 923 | 408.01 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 996 | 408.15 | atmosphere | 995.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 997 | 408.15 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 5 | 3 |