Os06g0198600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF985 family protein.
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Os06g0198600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF985 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.6 | 0.208 | 10.9 | -0.258 | 0.204 | -0.92 | 0.0891 | 0.228 | 0.0407 | 8.39 | 26.23 | 11 | -- | -- |
| 19.68 | 0.208 | 10.8 | -0.216 | 0.201 | -0.929 | 0.0549 | -- | 0.0505 | 8.28 | 26.23 | 11 | -- | -- |
| 19.61 | 0.206 | 10.9 | -0.254 | 0.207 | -0.922 | -- | 0.213 | 0.0401 | 8.3 | 26.31 | 13 | -- | -- |
| 19.68 | 0.208 | 10.8 | -0.214 | 0.2 | -0.929 | -- | -- | 0.0507 | 8.29 | 26.23 | 11 | -- | -- |
| 21.77 | 0.218 | 10.9 | -0.246 | -- | -0.961 | -- | 0.153 | 0.0399 | -- | 26.11 | 10 | -- | -- |
| 32.64 | 0.268 | 10.8 | 0.00118 | 0.332 | -- | 0.0238 | -- | 0.252 | 11.3 | -- | -- | -- | -- |
| 32.65 | 0.268 | 10.8 | 0.00216 | 0.332 | -- | -- | -- | 0.252 | 11.3 | -- | -- | -- | -- |
| 21.8 | 0.218 | 10.9 | -0.223 | -- | -0.974 | -- | -- | 0.0455 | -- | 25.96 | 6 | -- | -- |
| 20.79 | 0.214 | 10.8 | -- | 0.203 | -0.849 | -- | -- | 0.0901 | 8.77 | 26.2 | 11 | -- | -- |
| 39.55 | 0.294 | 10.8 | -0.00632 | -- | -- | -- | -- | 0.249 | -- | -- | -- | -- | -- |
| 32.65 | 0.267 | 10.8 | -- | 0.332 | -- | -- | -- | 0.252 | 11.3 | -- | -- | -- | -- |
| 23.02 | 0.224 | 10.8 | -- | -- | -0.907 | -- | -- | 0.0821 | -- | 26.04 | 2 | -- | -- |
| 39.55 | 0.294 | 10.8 | -- | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.90 | temperature | 25 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 3 | 19.92 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 7 | 19.96 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 9 | 19.97 | temperature | 25 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 17 | 20.00 | temperature | 25 | 10 | < th | dose dependent | no | NA | NA |
| 19 | 20.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 20 | 20.00 | temperature | 25 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 24 | 20.01 | temperature | 25 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 26 | 20.02 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 27 | 20.03 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 29 | 20.04 | temperature | 25 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 30 | 20.06 | temperature | 25 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 38 | 20.21 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 204 | 21.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 17 |
| 224 | 21.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |
| 250 | 21.72 | temperature | 25 | 720 | < th | dose dependent | sin | 19 | NA |
| 383 | 22.08 | humidity | 50 | 43200 | < th | dose dependent | sin | 8 | NA |
| 395 | 22.11 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 398 | 22.12 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 404 | 22.13 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 408 | 22.14 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 413 | 22.15 | temperature | 10 | 10 | > th | dose dependent | sin | 9 | NA |
| 415 | 22.15 | humidity | 60 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 420 | 22.16 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 6 |
| 423 | 22.16 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 10 |
| 425 | 22.16 | humidity | 50 | 43200 | < th | dose dependent | rect. | 21 | 17 |
| 450 | 22.18 | temperature | 10 | 720 | > th | dose dependent | rect. | 11 | 15 |
| 498 | 22.21 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 527 | 22.24 | temperature | 30 | 10 | < th | dose dependent | sin | 9 | NA |
| 538 | 22.25 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 563 | 22.27 | temperature | 20 | 4320 | < th | dose dependent | sin | 8 | NA |
| 572 | 22.27 | temperature | 15 | 10 | > th | dose dependent | rect. | 5 | 23 |
| 615 | 22.32 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 651 | 22.34 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 667 | 22.35 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 12 |
| 823 | 22.43 | humidity | 50 | 43200 | < th | dose dependent | rect. | 12 | 22 |
| 861 | 22.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 20 |
| 870 | 22.46 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 954 | 22.48 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 975 | 22.49 | humidity | 50 | 43200 | > th | dose independent | sin | 8 | NA |