Os06g0196200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0196200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 295.05 | 0.807 | 9.08 | -5.52 | 3.44 | -3.03 | 0.903 | 6.8 | -1.99 | 7.7 | 8.787 | 1345 | 15.8 | -- |
| 345.73 | 0.866 | 9.04 | -5.04 | 3.64 | -2.6 | 1.58 | -- | -1.9 | 7.5 | 40 | 1299 | 14.3 | -- |
| 292.78 | 0.797 | 9.12 | -5.53 | 3.47 | -3.15 | -- | 7.97 | -2.02 | 7.61 | 12.42 | 1238 | 15.8 | -- |
| 350.55 | 0.872 | 9.08 | -4.98 | 3.67 | -2.66 | -- | -- | -1.92 | 7.46 | 60 | 1322 | 13.9 | -- |
| 370.82 | 0.897 | 9.25 | -5.09 | -- | -4.97 | -- | 0.609 | -2.11 | -- | 179.1 | 1259 | 20.2 | -- |
| 479.26 | 1.03 | 8.95 | -4.74 | 3.21 | -- | 1.07 | -- | -1.37 | 7.83 | -- | -- | -- | -- |
| 482.5 | 1.03 | 8.95 | -4.71 | 3.21 | -- | -- | -- | -1.37 | 7.87 | -- | -- | -- | -- |
| 362.13 | 0.886 | 9.14 | -5.03 | -- | -4.71 | -- | -- | -1.79 | -- | 205.3 | 1267 | 20.3 | -- |
| 972.67 | 1.45 | 8.98 | -- | 3.74 | -2.32 | -- | -- | -1.31 | 8.08 | 212 | 1426 | 9.89 | -- |
| 1041.45 | 1.51 | 9.03 | -4.68 | -- | -- | -- | -- | -1.33 | -- | -- | -- | -- | -- |
| 1067.83 | 1.53 | 8.84 | -- | 3.18 | -- | -- | -- | -0.844 | 7.98 | -- | -- | -- | -- |
| 1015.7 | 1.48 | 8.99 | -- | -- | -4.11 | -- | -- | -1.1 | -- | 280.3 | 1257 | 20.2 | -- |
| 1618.39 | 1.88 | 8.92 | -- | -- | -- | -- | -- | -0.806 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 303.00 | radiation | 10 | 1440 | < th | dose dependent | sin | 20 | NA |
| 3 | 303.05 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 6 | 303.16 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 21 |
| 9 | 303.44 | radiation | 10 | 1440 | < th | dose dependent | rect. | 9 | 12 |
| 18 | 304.73 | humidity | 50 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 22 | 305.27 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 87 | 311.57 | radiation | 10 | 1440 | < th | dose dependent | sin | 15 | NA |
| 162 | 316.71 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 22 |
| 308 | 319.80 | radiation | 1 | 1440 | > th | dose dependent | rect. | 10 | 8 |
| 347 | 320.51 | radiation | 10 | 1440 | > th | dose independent | rect. | 9 | 8 |
| 423 | 321.76 | radiation | 1 | 1440 | > th | dose dependent | sin | 18 | NA |
| 467 | 322.52 | radiation | 10 | 1440 | > th | dose independent | sin | 22 | NA |
| 524 | 323.37 | radiation | 10 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 552 | 324.01 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 632 | 325.17 | humidity | 90 | 1440 | < th | dose dependent | sin | 0 | NA |
| 636 | 325.28 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 713 | 326.03 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 793 | 326.33 | humidity | 90 | 1440 | < th | dose dependent | rect. | 5 | 13 |
| 794 | 326.34 | radiation | 30 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 857 | 326.69 | radiation | 30 | 1440 | < th | dose dependent | rect. | 24 | 21 |
| 865 | 326.72 | radiation | 30 | 1440 | < th | dose dependent | no | NA | NA |