Os06g0192900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0192900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.07 | 0.42 | 11.5 | -1.21 | 2.16 | -0.996 | -0.0531 | -0.644 | 0.0583 | 5.81 | 25.06 | 10 | -- | -- |
| 80.13 | 0.417 | 11.5 | -1.15 | 2.15 | -1.03 | 0.0136 | -- | 0.0774 | 5.82 | 25.1 | 5 | -- | -- |
| 80.01 | 0.417 | 11.5 | -1.21 | 2.16 | -0.999 | -- | -0.627 | 0.0557 | 5.81 | 25.1 | 7 | -- | -- |
| 80.12 | 0.417 | 11.5 | -1.14 | 2.16 | -1.05 | -- | -- | 0.0729 | 5.83 | 25.1 | 5 | -- | -- |
| 222.36 | 0.695 | 11.5 | -0.535 | -- | -2.78 | -- | 2.42 | 0.367 | -- | 24.4 | 252 | -- | -- |
| 96.46 | 0.46 | 11.5 | -1.3 | 2.46 | -- | 0.422 | -- | -0.00375 | 5.38 | -- | -- | -- | -- |
| 96.9 | 0.461 | 11.5 | -1.29 | 2.46 | -- | -- | -- | -0.00561 | 5.39 | -- | -- | -- | -- |
| 224.32 | 0.698 | 11.5 | -0.789 | -- | -2.56 | -- | -- | 0.299 | -- | 24.3 | 266 | -- | -- |
| 112.37 | 0.494 | 11.5 | -- | 2.01 | -1.28 | -- | -- | 0.256 | 5.93 | 24.2 | 38 | -- | -- |
| 411.81 | 0.948 | 11.6 | -1.21 | -- | -- | -- | -- | 0.0551 | -- | -- | -- | -- | -- |
| 141.07 | 0.556 | 11.5 | -- | 2.44 | -- | -- | -- | 0.139 | 5.41 | -- | -- | -- | -- |
| 240.69 | 0.723 | 11.5 | -- | -- | -2.68 | -- | -- | 0.398 | -- | 24.3 | 267 | -- | -- |
| 450.52 | 0.991 | 11.5 | -- | -- | -- | -- | -- | 0.189 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.74 | temperature | 25 | 270 | < th | dose independent | rect. | 1 | 15 |
| 4 | 74.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 5 | 74.27 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 15 | 74.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 11 |
| 59 | 76.48 | temperature | 25 | 90 | > th | dose dependent | sin | 2 | NA |
| 72 | 76.82 | temperature | 25 | 270 | > th | dose independent | sin | 3 | NA |
| 79 | 77.02 | temperature | 25 | 270 | > th | dose independent | rect. | 6 | 10 |
| 81 | 77.05 | temperature | 25 | 270 | < th | dose independent | sin | 4 | NA |
| 107 | 77.44 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 4 |
| 144 | 77.92 | temperature | 25 | 720 | > th | dose independent | rect. | 8 | 1 |
| 172 | 78.19 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 19 |
| 194 | 78.46 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 17 |
| 201 | 78.48 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 17 |
| 207 | 78.52 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 19 |
| 210 | 78.58 | temperature | 25 | 10 | > th | dose independent | rect. | 8 | 12 |
| 221 | 78.67 | temperature | 25 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 238 | 78.80 | temperature | 25 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 267 | 79.01 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 339 | 79.38 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 457 | 79.86 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 475 | 79.91 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 21 |
| 479 | 79.93 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 13 |
| 493 | 79.95 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 18 |
| 517 | 80.00 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 562 | 80.10 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 611 | 80.18 | temperature | 25 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 717 | 80.44 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 6 |
| 793 | 80.61 | temperature | 25 | 270 | > th | dose dependent | rect. | 23 | 15 |
| 822 | 80.70 | temperature | 30 | 90 | < th | dose dependent | sin | 0 | NA |
| 840 | 80.75 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 5 |
| 848 | 80.78 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 854 | 80.81 | temperature | 25 | 720 | < th | dose independent | rect. | 9 | 3 |
| 859 | 80.82 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 880 | 80.87 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 9 |
| 944 | 81.04 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 2 |