Os06g0192000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0192000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215.65 | 0.684 | 3.61 | 2.26 | 0.181 | 0.669 | 0.914 | 3.05 | 0.312 | 3.13 | 20 | 4320 | -- | -- |
| 218.39 | 0.688 | 3.66 | 2.3 | 0.0859 | 0.845 | 0.92 | -- | 0.301 | 3.11 | 22.12 | 5118 | -- | -- |
| 218.39 | 0.688 | 3.61 | 2.26 | 0.181 | 0.669 | -- | 3.05 | 0.312 | 3.13 | 19.99 | 4322 | -- | -- |
| 219.87 | 0.691 | 3.66 | 2.44 | 0.112 | 0.9 | -- | -- | 0.385 | 3.57 | 21.87 | 5125 | -- | -- |
| 216.95 | 0.686 | 3.61 | 2.23 | -- | 0.827 | -- | 3.04 | 0.329 | -- | 20 | 4878 | -- | -- |
| 237.07 | 0.722 | 3.67 | 2.46 | 0.142 | -- | 0.84 | -- | 0.247 | 3.01 | -- | -- | -- | -- |
| 237.72 | 0.722 | 3.67 | 2.45 | 0.237 | -- | -- | -- | 0.24 | 6.13 | -- | -- | -- | -- |
| 220.3 | 0.691 | 3.64 | 2.47 | -- | 0.889 | -- | -- | 0.399 | -- | 21.7 | 5079 | -- | -- |
| 365.12 | 0.89 | 3.69 | -- | 0.144 | 1.16 | -- | -- | 0.165 | 3.62 | 29.99 | 6563 | -- | -- |
| 240.64 | 0.725 | 3.67 | 2.45 | -- | -- | -- | -- | 0.245 | -- | -- | -- | -- | -- |
| 395.34 | 0.93 | 3.73 | -- | 0.275 | -- | -- | -- | -0.0323 | 5.67 | -- | -- | -- | -- |
| 358.53 | 0.882 | 3.69 | -- | -- | 1.09 | -- | -- | 0.231 | -- | 30 | 15304 | -- | -- |
| 399.25 | 0.933 | 3.73 | -- | -- | -- | -- | -- | -0.0267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.26 | wind | 1 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 2 | 210.91 | wind | 1 | 43200 | > th | dose independent | rect. | 2 | 2 |
| 3 | 210.98 | radiation | 10 | 14400 | < th | dose independent | rect. | 5 | 2 |
| 4 | 210.99 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 4 |
| 6 | 211.02 | radiation | 10 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 9 | 211.03 | radiation | 10 | 14400 | < th | dose independent | rect. | 22 | 9 |
| 11 | 211.04 | radiation | 20 | 4320 | < th | dose independent | rect. | 16 | 10 |
| 21 | 211.13 | radiation | 1 | 4320 | > th | dose dependent | rect. | 16 | 13 |
| 22 | 211.15 | radiation | 10 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 23 | 211.16 | radiation | 1 | 4320 | > th | dose dependent | rect. | 16 | 3 |
| 35 | 211.17 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 36 | 211.18 | radiation | 20 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 59 | 211.28 | radiation | 30 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 66 | 211.29 | radiation | 1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 80 | 211.38 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 4 |
| 93 | 211.48 | radiation | 40 | 4320 | < th | dose dependent | rect. | 16 | 10 |
| 199 | 212.14 | radiation | 20 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 200 | 212.15 | radiation | 20 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 203 | 212.16 | radiation | 20 | 14400 | < th | dose independent | rect. | 24 | 10 |
| 249 | 212.39 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 258 | 212.45 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 277 | 212.50 | radiation | 10 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 291 | 212.56 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 295 | 212.67 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 296 | 212.67 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 310 | 212.77 | radiation | 20 | 14400 | < th | dose independent | sin | 10 | NA |
| 311 | 212.79 | radiation | 20 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 386 | 212.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 18 | 2 |
| 387 | 212.95 | humidity | 80 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 398 | 212.97 | radiation | 40 | 14400 | > th | dose dependent | sin | 9 | NA |
| 434 | 213.03 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 477 | 213.08 | humidity | 80 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 486 | 213.17 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 490 | 213.19 | radiation | 30 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 491 | 213.19 | radiation | 10 | 14400 | < th | dose independent | rect. | 17 | 20 |
| 492 | 213.20 | radiation | 30 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 590 | 213.34 | radiation | 10 | 14400 | < th | dose independent | rect. | 9 | 4 |
| 618 | 213.40 | temperature | 25 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 619 | 213.40 | radiation | 40 | 14400 | > th | dose dependent | rect. | 10 | 22 |
| 733 | 213.50 | radiation | 40 | 14400 | > th | dose dependent | no | NA | NA |
| 879 | 213.54 | radiation | 20 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 914 | 213.56 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 23 |
| 965 | 213.62 | radiation | 30 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 978 | 213.63 | radiation | 20 | 4320 | < th | dose independent | sin | 14 | NA |