Os06g0189600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1677, Oryza sativa family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0189600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1677, Oryza sativa family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.42 | 0.287 | 10.2 | 0.654 | 1.3 | 0.486 | 0.218 | -1.25 | 0.0608 | 15.4 | 24.9 | 489 | -- | -- |
| 39.4 | 0.292 | 10.2 | 0.545 | 1.36 | 0.708 | 0.26 | -- | 0.0533 | 15.3 | 24.1 | 335 | -- | -- |
| 37.55 | 0.285 | 10.2 | 0.665 | 1.3 | 0.487 | -- | -1.3 | 0.0637 | 15.4 | 25 | 464 | -- | -- |
| 39.27 | 0.292 | 10.2 | 0.451 | 1.33 | 0.655 | -- | -- | 0.0164 | 15.3 | 24.1 | 337 | -- | -- |
| 113.49 | 0.499 | 10.2 | 0.316 | -- | -1.12 | -- | -2.11 | -0.208 | -- | 40.17 | 1114 | -- | -- |
| 44.75 | 0.314 | 10.2 | 0.284 | 1.27 | -- | 0.307 | -- | -0.102 | 15.2 | -- | -- | -- | -- |
| 45.05 | 0.314 | 10.2 | 0.29 | 1.27 | -- | -- | -- | -0.1 | 15.2 | -- | -- | -- | -- |
| 117.28 | 0.507 | 10.2 | 0.0251 | -- | -1.16 | -- | -- | -0.288 | -- | 40.17 | 1114 | -- | -- |
| 44.15 | 0.309 | 10.2 | -- | 1.29 | 0.496 | -- | -- | -0.0557 | 15.3 | 23.8 | 326 | -- | -- |
| 136.68 | 0.546 | 10.2 | 0.236 | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
| 47.27 | 0.322 | 10.2 | -- | 1.26 | -- | -- | -- | -0.133 | 15.2 | -- | -- | -- | -- |
| 117.29 | 0.506 | 10.2 | -- | -- | -1.17 | -- | -- | -0.292 | -- | 40.17 | 1114 | -- | -- |
| 138.15 | 0.549 | 10.2 | -- | -- | -- | -- | -- | -0.16 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.26 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 2 | 35.75 | radiation | 10.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 4 | 35.93 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 7 | 35.98 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 14 |
| 8 | 36.02 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 10 |
| 9 | 36.02 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 11 | 36.06 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 17 | 36.18 | radiation | 10.0 | 90 | < th | dose independent | rect. | 3 | 19 |
| 20 | 36.27 | radiation | 30.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 24 | 36.31 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 23 |
| 35 | 36.39 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 18 |
| 38 | 36.40 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 50 | 36.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 51 | 36.48 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 60 | 36.52 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 67 | 36.55 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 20 | 15 |
| 75 | 36.60 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 20 | 17 |
| 78 | 36.62 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 79 | 36.62 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 10 |
| 86 | 36.62 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 87 | 36.63 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 117 | 36.68 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 14 | 18 |
| 120 | 36.70 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 19 |
| 135 | 36.75 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 136 | 36.75 | temperature | 30.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 140 | 36.76 | wind | 5.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 162 | 36.82 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 18 |
| 177 | 36.85 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 21 | 5 |
| 202 | 36.91 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 7 | 17 |
| 214 | 36.94 | temperature | 15.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 215 | 36.94 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 217 | 36.95 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 223 | 36.96 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 24 | 21 |
| 230 | 36.96 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 231 | 36.96 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 274 | 37.04 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 280 | 37.06 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 22 | 5 |
| 290 | 37.07 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 292 | 37.07 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 10 |
| 300 | 37.09 | humidity | 50.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 333 | 37.13 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 22 | 7 |
| 356 | 37.16 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 22 | 7 |
| 358 | 37.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 360 | 37.16 | temperature | 10.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 361 | 37.16 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 20 | 15 |
| 372 | 37.17 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 377 | 37.18 | radiation | 10.0 | 10 | < th | dose independent | rect. | 24 | 22 |
| 384 | 37.20 | radiation | 10.0 | 90 | < th | dose independent | rect. | 23 | 23 |
| 391 | 37.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 413 | 37.24 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 22 | 7 |
| 442 | 37.27 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 5 |
| 443 | 37.27 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 22 | 6 |
| 454 | 37.28 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 22 | 8 |
| 465 | 37.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 2 |
| 473 | 37.30 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 475 | 37.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 11 | 9 |
| 476 | 37.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 11 | 9 |
| 488 | 37.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 20 | 15 |
| 525 | 37.35 | wind | 9.0 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 537 | 37.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 15 | 15 |
| 538 | 37.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 545 | 37.37 | wind | 1.0 | 270 | > th | dose independent | rect. | 11 | 9 |
| 546 | 37.37 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 13 | 9 |
| 548 | 37.37 | temperature | 10.0 | 720 | > th | dose dependent | sin | 15 | NA |
| 558 | 37.38 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 559 | 37.38 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 561 | 37.38 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 577 | 37.39 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 581 | 37.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 20 | 15 |
| 582 | 37.40 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 17 |
| 585 | 37.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 20 | 15 |
| 593 | 37.41 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 9 |
| 600 | 37.41 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 9 |
| 607 | 37.41 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 618 | 37.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 7 |
| 622 | 37.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 7 |
| 652 | 37.46 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 18 |
| 674 | 37.48 | humidity | 70.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 675 | 37.48 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 703 | 37.50 | temperature | 15.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 704 | 37.50 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 715 | 37.51 | temperature | 30.0 | 270 | < th | dose independent | rect. | 24 | 7 |
| 716 | 37.51 | humidity | 50.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 718 | 37.51 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 7 |
| 724 | 37.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 17 |
| 759 | 37.54 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 3 |
| 772 | 37.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 9 |
| 773 | 37.54 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 15 |
| 776 | 37.54 | radiation | 20.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 781 | 37.54 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 15 |
| 789 | 37.55 | wind | 9.0 | 270 | < th | dose independent | rect. | 11 | 9 |
| 857 | 37.60 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 23 | 4 |
| 875 | 37.60 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 891 | 37.61 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 903 | 37.61 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 913 | 37.62 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 19 | 6 |
| 936 | 37.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 15 |
| 940 | 37.64 | temperature | 15.0 | 270 | > th | dose independent | rect. | 4 | 23 |
| 966 | 37.65 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 13 | 9 |
| 999 | 37.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 17 |