Os06g0187700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0187700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.17 | 0.415 | 7.95 | 0.883 | 0.682 | 0.805 | -0.544 | -0.263 | 0.0763 | 10.1 | 34.69 | 1237 | -- | -- |
| 78.27 | 0.412 | 7.95 | 0.91 | 0.683 | 0.799 | -0.506 | -- | 0.0842 | 10.1 | 35.1 | 1236 | -- | -- |
| 79.27 | 0.415 | 7.95 | 0.881 | 0.683 | 0.807 | -- | -0.0953 | 0.0817 | 10.2 | 35 | 1237 | -- | -- |
| 79.29 | 0.415 | 7.95 | 0.893 | 0.683 | 0.804 | -- | -- | 0.0844 | 10.2 | 35 | 1237 | -- | -- |
| 102.27 | 0.471 | 7.94 | 1.04 | -- | 0.814 | -- | 0.534 | 0.151 | -- | 35.32 | 1702 | -- | -- |
| 99.23 | 0.467 | 7.92 | 0.99 | 0.536 | -- | -0.611 | -- | 0.224 | 9.66 | -- | -- | -- | -- |
| 100.61 | 0.47 | 7.92 | 0.968 | 0.537 | -- | -- | -- | 0.224 | 9.79 | -- | -- | -- | -- |
| 101.63 | 0.47 | 7.97 | 0.925 | -- | 0.793 | -- | -- | 0.0976 | -- | 30.82 | 1700 | -- | -- |
| 99.3 | 0.464 | 7.98 | -- | 0.723 | 0.842 | -- | -- | -0.0331 | 9.97 | 30.01 | 1219 | -- | -- |
| 117.82 | 0.507 | 7.94 | 0.962 | -- | -- | -- | -- | 0.224 | -- | -- | -- | -- | -- |
| 125.3 | 0.524 | 7.95 | -- | 0.535 | -- | -- | -- | 0.116 | 9.66 | -- | -- | -- | -- |
| 120.22 | 0.511 | 8 | -- | -- | 0.735 | -- | -- | -0.0543 | -- | 10 | 1513 | -- | -- |
| 142.26 | 0.557 | 7.96 | -- | -- | -- | -- | -- | 0.117 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 80.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 2 | 80.19 | temperature | 20.0 | 10 | > th | dose independent | rect. | 7 | 21 |
| 3 | 80.45 | temperature | 20.0 | 270 | > th | dose independent | rect. | 17 | 8 |
| 4 | 80.68 | temperature | 20.0 | 90 | > th | dose independent | rect. | 19 | 8 |
| 7 | 80.91 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 9 |
| 8 | 81.04 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 7 | 20 |
| 11 | 81.29 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 16 |
| 12 | 81.29 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 16 |
| 13 | 81.36 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 3 |
| 15 | 81.38 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 17 | 81.44 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 20 | 81.51 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 22 | 81.57 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 60 | 81.72 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 18 | 9 |
| 61 | 81.73 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 16 |
| 62 | 81.73 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 64 | 81.77 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 6 | 21 |
| 68 | 81.81 | humidity | 70.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 69 | 81.81 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 8 | 7 |
| 79 | 81.86 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 95 | 81.88 | radiation | 10.0 | 1440 | > th | dose dependent | sin | 2 | NA |
| 119 | 81.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 3 |
| 135 | 81.98 | wind | 7.0 | 270 | < th | dose independent | rect. | 13 | 16 |
| 219 | 82.09 | radiation | 10.0 | 1440 | > th | dose dependent | no | NA | NA |
| 302 | 82.10 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 360 | 82.14 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 364 | 82.15 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 7 | 8 |
| 400 | 82.22 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 411 | 82.25 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 20 | 19 |
| 413 | 82.26 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 4 |
| 414 | 82.26 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 23 | 16 |
| 417 | 82.27 | wind | 5.0 | 270 | < th | dose independent | rect. | 1 | 4 |
| 428 | 82.28 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 431 | 82.28 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 3 | 12 |
| 526 | 82.33 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 17 | 11 |
| 527 | 82.33 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 22 |
| 533 | 82.34 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 537 | 82.34 | radiation | 1.0 | 90 | < th | dose independent | rect. | 6 | 21 |
| 556 | 82.35 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 7 | 21 |
| 557 | 82.36 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 9 |
| 558 | 82.36 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 559 | 82.36 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 574 | 82.36 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 7 | 18 |
| 589 | 82.38 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 8 | 6 |
| 591 | 82.38 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 7 | 14 |
| 598 | 82.39 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 603 | 82.39 | radiation | 40.0 | 1440 | < th | dose dependent | sin | 0 | NA |
| 629 | 82.40 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 735 | 82.42 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 752 | 82.43 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 758 | 82.43 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 7 | 21 |
| 773 | 82.45 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 3 | 12 |
| 829 | 82.47 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 847 | 82.49 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 874 | 82.52 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 17 |
| 875 | 82.52 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 19 |
| 891 | 82.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 12 |
| 892 | 82.54 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 899 | 82.54 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 916 | 82.57 | radiation | 20.0 | 1440 | < th | dose independent | sin | 1 | NA |
| 919 | 82.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 5 | 8 |
| 920 | 82.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 8 |
| 921 | 82.57 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 16 |
| 932 | 82.58 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 939 | 82.58 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 10 |
| 956 | 82.60 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 8 |