Os06g0186700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Biopterin transport-related protein BT1 family protein.
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Os06g0186700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Biopterin transport-related protein BT1 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 20.02 | 0.21 | 8.97 | -1.18 | 0.408 | -0.823 | 0.12 | 0.0151 | -0.0968 | 1.05 | 25.36 | 77 | -- | -- |
| 19.99 | 0.208 | 8.97 | -1.17 | 0.42 | -0.823 | 0.133 | -- | -0.102 | 1.1 | 25.66 | 65 | -- | -- |
| 20.06 | 0.209 | 8.97 | -1.19 | 0.419 | -0.821 | -- | 0.118 | -0.107 | 1.14 | 25.6 | 74 | -- | -- |
| 20.06 | 0.209 | 8.97 | -1.18 | 0.418 | -0.822 | -- | -- | -0.101 | 1.1 | 25.57 | 65 | -- | -- |
| 24.65 | 0.231 | 8.96 | -1.22 | -- | -0.757 | -- | 0.207 | -0.0588 | -- | 35.78 | 956 | -- | -- |
| 29.84 | 0.256 | 8.93 | -0.974 | 0.253 | -- | 0.124 | -- | 0.0723 | 0.374 | -- | -- | -- | -- |
| 29.91 | 0.256 | 8.93 | -0.979 | 0.253 | -- | -- | -- | 0.0717 | 0.423 | -- | -- | -- | -- |
| 24.69 | 0.231 | 8.95 | -1.18 | -- | -0.754 | -- | -- | -0.0481 | -- | 50.55 | 961 | -- | -- |
| 52.99 | 0.341 | 8.92 | -- | 0.316 | -0.364 | -- | -- | 0.114 | 0.541 | 25.57 | 65 | -- | -- |
| 33.93 | 0.272 | 8.92 | -0.971 | -- | -- | -- | -- | 0.0758 | -- | -- | -- | -- | -- |
| 55.18 | 0.347 | 8.9 | -- | 0.239 | -- | -- | -- | 0.181 | 0.214 | -- | -- | -- | -- |
| 57.33 | 0.353 | 8.91 | -- | -- | -0.286 | -- | -- | 0.147 | -- | 37.42 | 866 | -- | -- |
| 58.79 | 0.358 | 8.9 | -- | -- | -- | -- | -- | 0.183 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.02 | temperature | 25 | 90 | < th | dose dependent | rect. | 9 | 22 |
| 4 | 20.08 | temperature | 25 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 5 | 20.08 | temperature | 25 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 6 | 20.10 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 8 | 20.11 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 10 | 20.12 | temperature | 25 | 90 | < th | dose dependent | no | NA | NA |
| 19 | 20.14 | temperature | 25 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 24 | 20.15 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 26 | 20.16 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 28 | 20.16 | temperature | 25 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 30 | 20.17 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 34 | 20.21 | temperature | 25 | 90 | < th | dose dependent | rect. | 11 | 20 |
| 188 | 21.13 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 200 | 21.20 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 15 |
| 215 | 21.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 16 |
| 259 | 21.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 23 |
| 260 | 21.37 | temperature | 25 | 30 | < th | dose dependent | sin | 17 | NA |
| 270 | 21.39 | temperature | 10 | 720 | > th | dose dependent | sin | 18 | NA |
| 335 | 21.50 | temperature | 30 | 720 | < th | dose dependent | sin | 18 | NA |
| 381 | 21.59 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 382 | 21.60 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 529 | 21.77 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 567 | 21.81 | temperature | 10 | 10 | > th | dose dependent | sin | 14 | NA |
| 606 | 21.84 | temperature | 10 | 270 | > th | dose dependent | sin | 13 | NA |