Os06g0185500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os06g0185500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 238.44 | 0.726 | 3.11 | 0.0361 | 0.673 | 1.65 | -0.924 | -0.602 | 0.432 | 7.69 | 5.213 | 1850 | -- | -- |
| 238.39 | 0.719 | 3.11 | 0.0448 | 0.666 | 1.74 | -0.904 | -- | 0.442 | 7.69 | 5.649 | 1885 | -- | -- |
| 240.67 | 0.723 | 3.12 | 0.0168 | 0.671 | 1.77 | -- | 0.366 | 0.443 | 7.81 | 5.711 | 1852 | -- | -- |
| 240.69 | 0.723 | 3.12 | 0.0261 | 0.665 | 1.73 | -- | -- | 0.439 | 7.75 | 5.6 | 1851 | -- | -- |
| 255.01 | 0.744 | 3.14 | -0.0269 | -- | 1.52 | -- | 0.826 | 0.455 | -- | 8.6 | 2758 | -- | -- |
| 270.58 | 0.771 | 3.15 | -0.358 | 0.572 | -- | -0.7 | -- | 0.31 | 7.34 | -- | -- | -- | -- |
| 271.89 | 0.772 | 3.15 | -0.372 | 0.57 | -- | -- | -- | 0.311 | 7.45 | -- | -- | -- | -- |
| 255.13 | 0.744 | 3.13 | -0.0253 | -- | 1.39 | -- | -- | 0.48 | -- | 8.652 | 2755 | -- | -- |
| 240.7 | 0.723 | 3.12 | -- | 0.66 | 1.71 | -- | -- | 0.438 | 7.76 | 5.631 | 1851 | -- | -- |
| 289.26 | 0.795 | 3.16 | -0.364 | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
| 275.55 | 0.776 | 3.14 | -- | 0.567 | -- | -- | -- | 0.353 | 7.49 | -- | -- | -- | -- |
| 255.13 | 0.744 | 3.12 | -- | -- | 1.4 | -- | -- | 0.483 | -- | 8.6 | 2758 | -- | -- |
| 292.74 | 0.799 | 3.15 | -- | -- | -- | -- | -- | 0.361 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.50 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 3 | 234.58 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 4 | 234.94 | wind | 9 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 5 | 234.96 | wind | 7 | 4320 | < th | dose independent | rect. | 23 | 1 |
| 6 | 235.54 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 8 | 235.75 | wind | 9 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 9 | 235.76 | wind | 9 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 10 | 235.76 | wind | 9 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 11 | 235.76 | wind | 9 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 14 | 235.91 | wind | 9 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 22 | 236.01 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 23 | 236.03 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 32 | 236.15 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 14 |
| 58 | 236.51 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 65 | 236.65 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 67 | 236.66 | wind | 7 | 4320 | > th | dose dependent | sin | 10 | NA |
| 70 | 236.71 | wind | 9 | 4320 | < th | dose independent | sin | 11 | NA |
| 80 | 236.82 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 11 |
| 93 | 236.98 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 12 |
| 96 | 237.02 | wind | 7 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 98 | 237.05 | wind | 7 | 4320 | > th | dose independent | sin | 10 | NA |
| 105 | 237.16 | wind | 7 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 126 | 237.34 | wind | 7 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 140 | 237.55 | wind | 9 | 1440 | > th | dose dependent | rect. | 21 | 13 |
| 148 | 237.65 | wind | 9 | 4320 | < th | dose independent | rect. | 21 | 8 |
| 154 | 237.76 | wind | 9 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 161 | 237.80 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 168 | 237.87 | wind | 7 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 181 | 238.01 | wind | 7 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 184 | 238.02 | wind | 7 | 1440 | < th | dose independent | rect. | 21 | 13 |
| 186 | 238.04 | wind | 7 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 188 | 238.07 | wind | 7 | 1440 | > th | dose independent | rect. | 21 | 13 |
| 194 | 238.11 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 19 |
| 272 | 238.55 | wind | 9 | 4320 | < th | dose independent | rect. | 16 | 21 |
| 283 | 238.62 | wind | 7 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 288 | 238.64 | wind | 9 | 4320 | < th | dose independent | rect. | 21 | 10 |
| 292 | 238.66 | wind | 7 | 1440 | > th | dose dependent | rect. | 3 | 7 |
| 301 | 238.70 | wind | 7 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 310 | 238.73 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 9 |
| 405 | 239.11 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 21 |
| 436 | 239.27 | wind | 5 | 1440 | > th | dose dependent | rect. | 18 | 20 |
| 441 | 239.30 | wind | 7 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 453 | 239.34 | wind | 9 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 517 | 239.55 | wind | 7 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 563 | 239.69 | wind | 5 | 1440 | > th | dose independent | rect. | 21 | 17 |
| 652 | 239.92 | wind | 5 | 1440 | < th | dose independent | rect. | 21 | 17 |
| 805 | 240.31 | wind | 5 | 1440 | > th | dose dependent | rect. | 21 | 17 |
| 934 | 240.66 | wind | 5 | 1440 | > th | dose dependent | rect. | 12 | 22 |
| 975 | 240.75 | wind | 7 | 4320 | < th | dose independent | rect. | 1 | 4 |