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Os06g0185400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.89 (0.051) R2 : 0.57
β1 : -1.67 (0.233) R2dD : 0.0948 R2D : -0.129
β2 : 1.9 (0.138) R2dC : 0.252 R2C : 0.0255
β3 : -3.05 (0.256) R2dE : 0.211 R2E : 0.0981
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : 10.2 (0.82) R2dD*E : 0.264 R2D*E : 0.191
γ1 : 0.452 (0.116) R2dN8 : 0.0275 R2N8 : 0.0979
σ : 0.886
deviance : 361.88
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C
peak time of C : 8.5
E
wheather : temperature
threshold : 31.17
memory length : 1089
response mode : < th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 5.98
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
355.14 0.885 7.89 -1.64 2.7 -3.6 -4.94 14.3 0.433 8.43 30.15 748 3.25 --
450.09 0.988 7.68 0.0177 1.49 -3.09 3.42 -- 0.966 8.51 23.18 706 1.79 --
361.88 0.886 7.89 -1.67 1.9 -3.05 -- 10.2 0.452 8.5 31.17 1089 5.98 --
459.54 0.998 7.64 0.124 1.71 -4.29 -- -- 1.08 7.26 22.12 333 0.00105 --
478.4 1.02 8.01 -2.18 -- -2.2 -- 10.2 0.335 -- 28 1241 5.18 --
568.1 1.12 7.6 0.69 1.06 -- 3.77 -- 1.45 8.39 -- -- -- --
601.05 1.15 7.6 0.786 1.18 -- -- -- 1.43 6.9 -- -- -- --
519.32 1.06 7.83 -1.78 -- -3.71 -- -- 0.557 -- 20.71 11030 5.56 --
459.19 0.998 7.67 -- 1.66 -4.35 -- -- 1.05 7.2 22.03 332 0.000402 --
674.51 1.21 7.63 0.812 -- -- -- -- 1.46 -- -- -- -- --
617.35 1.16 7.62 -- 1.19 -- -- -- 1.35 6.86 -- -- -- --
540.41 1.08 7.75 -- -- -2.95 -- -- 0.909 -- 21.69 5334 5.74 --
691.88 1.23 7.65 -- -- -- -- -- 1.37 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 351.23 temperature 10 720 > th dose dependent rect. 18 17
2 352.06 temperature 30 720 < th dose dependent rect. 20 14
9 355.00 radiation 1 43200 < th dose dependent rect. 4 1
10 355.07 radiation 1 43200 < th dose dependent rect. 2 3
15 355.93 temperature 30 720 < th dose dependent rect. 21 12
17 356.16 temperature 30 720 < th dose dependent sin 9 NA
19 356.68 radiation 1 43200 < th dose independent rect. 18 11
22 357.05 temperature 15 720 > th dose dependent sin 10 NA
23 357.06 radiation 1 43200 < th dose dependent rect. 21 8
27 357.55 radiation 1 43200 > th dose independent rect. 18 11
33 359.23 radiation 1 43200 < th dose independent rect. 18 2
38 359.34 radiation 1 43200 < th dose independent rect. 18 6
40 359.46 radiation 1 43200 < th dose independent rect. 18 8
46 360.27 radiation 1 43200 > th dose independent rect. 18 1
88 365.25 wind 5 43200 > th dose independent rect. 15 1
89 365.35 wind 1 43200 < th dose independent rect. 23 3
97 366.33 wind 5 43200 < th dose independent rect. 15 1
103 367.03 wind 1 43200 > th dose independent rect. 23 3
138 370.61 humidity 70 43200 < th dose dependent rect. 10 1
147 371.68 temperature 10 720 > th dose dependent rect. 23 7
149 371.84 humidity 80 43200 < th dose dependent rect. 20 2
167 372.79 radiation 30 43200 < th dose independent rect. 9 1
183 373.70 wind 1 43200 < th dose dependent rect. 24 2
185 373.81 humidity 60 43200 > th dose independent rect. 19 18
187 373.87 wind 3 43200 > th dose dependent rect. 15 1
193 374.04 radiation 40 43200 > th dose independent rect. 11 1
197 374.09 radiation 20 43200 > th dose independent rect. 8 2
198 374.10 wind 5 43200 < th dose independent rect. 14 7
201 374.23 wind 5 43200 > th dose independent rect. 14 6
225 375.03 wind 3 43200 > th dose independent rect. 20 1
253 375.79 radiation 20 43200 > th dose dependent rect. 9 1
254 375.82 humidity 80 43200 < th dose dependent rect. 20 14
258 375.89 humidity 70 43200 < th dose dependent rect. 19 18
291 376.33 humidity 90 14400 > th dose dependent rect. 18 12
304 376.63 humidity 50 43200 > th dose independent rect. 15 8
340 377.28 humidity 70 43200 < th dose independent rect. 20 14
352 377.47 humidity 70 43200 < th dose independent rect. 4 7
353 377.47 wind 9 43200 < th dose dependent rect. 11 6
373 377.81 humidity 50 43200 > th dose independent rect. 15 3
410 378.12 humidity 70 43200 > th dose independent rect. 4 6
419 378.22 humidity 90 14400 > th dose dependent rect. 21 7
434 378.45 humidity 60 43200 < th dose independent rect. 19 18
445 378.53 humidity 90 14400 > th dose dependent rect. 5 1
473 378.78 humidity 80 43200 < th dose independent rect. 20 4
477 378.84 humidity 90 14400 > th dose dependent sin 10 NA
521 379.38 humidity 90 14400 > th dose dependent rect. 22 5
542 379.57 wind 3 43200 > th dose dependent rect. 12 9
571 379.74 humidity 70 43200 > th dose independent rect. 20 14
572 379.75 humidity 50 43200 < th dose independent rect. 16 2
584 379.91 wind 3 43200 < th dose dependent rect. 20 2
596 380.05 wind 3 43200 < th dose independent rect. 20 1
627 380.25 radiation 1 14400 < th dose dependent rect. 18 2
659 380.36 humidity 80 43200 > th dose independent rect. 20 4
660 380.36 radiation 30 43200 < th dose dependent rect. 8 1
721 380.80 humidity 60 43200 > th dose independent rect. 11 1
728 380.86 wind 7 43200 < th dose dependent rect. 11 11
744 380.99 radiation 30 43200 < th dose independent rect. 6 1
750 381.03 wind 1 43200 > th dose dependent rect. 11 13
757 381.10 humidity 70 43200 > th dose independent rect. 19 2
768 381.16 temperature 20 1440 > th dose dependent rect. 5 4
808 381.44 humidity 70 43200 < th dose independent rect. 19 1
810 381.45 wind 3 43200 > th dose dependent rect. 13 11
828 381.60 radiation 40 43200 < th dose independent rect. 13 1
840 381.66 radiation 10 43200 < th dose independent rect. 12 2
865 381.75 wind 9 43200 < th dose dependent rect. 14 1
901 381.87 radiation 20 43200 > th dose independent sin 9 NA
917 381.97 radiation 20 43200 < th dose independent rect. 20 18
921 381.98 radiation 20 43200 < th dose independent rect. 2 12
930 381.99 radiation 20 43200 < th dose independent rect. 4 10
936 382.00 radiation 20 43200 < th dose independent rect. 6 8
942 382.04 temperature 20 1440 > th dose dependent rect. 2 8
949 382.08 temperature 20 1440 > th dose dependent rect. 6 2
952 382.08 temperature 20 1440 > th dose dependent rect. 16 12
955 382.10 temperature 20 4320 < th dose independent rect. 21 2
984 382.21 humidity 50 43200 > th dose independent rect. 15 18