Os06g0185200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os06g0185200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 275.43 | 0.78 | 6.78 | -4.93 | 0.531 | 1.55 | 1.12 | -22.7 | 0.267 | 4.93 | 28.79 | 3972 | -- | -- |
| 318.34 | 0.837 | 6.26 | -1.09 | 0.237 | -1.37 | 0.973 | -- | 0.847 | 10.4 | 24.09 | 47520 | -- | -- |
| 278.11 | 0.777 | 6.78 | -4.91 | 0.542 | 1.57 | -- | -22.8 | 0.282 | 4.3 | 28.89 | 3973 | -- | -- |
| 316.71 | 0.829 | 6.14 | -0.363 | 0.449 | -0.948 | -- | -- | 1.25 | 4.34 | 29.4 | 34317 | -- | -- |
| 293.37 | 0.798 | 6.8 | -5.04 | -- | 1.8 | -- | -24.6 | 0.322 | -- | 29.07 | 3770 | -- | -- |
| 352.15 | 0.88 | 6.29 | -1.28 | 0.404 | -- | 1.16 | -- | 0.691 | 5.7 | -- | -- | -- | -- |
| 354.32 | 0.881 | 6.29 | -1.27 | 0.43 | -- | -- | -- | 0.685 | 4.49 | -- | -- | -- | -- |
| 325.31 | 0.84 | 6.19 | -0.49 | -- | -1.06 | -- | -- | 1.19 | -- | 29.93 | 34194 | -- | -- |
| 321.44 | 0.835 | 6.15 | -- | 0.457 | -1.27 | -- | -- | 1.31 | 4.23 | 24.2 | 47520 | -- | -- |
| 364.21 | 0.892 | 6.29 | -1.26 | -- | -- | -- | -- | 0.696 | -- | -- | -- | -- | -- |
| 397.02 | 0.932 | 6.26 | -- | 0.406 | -- | -- | -- | 0.826 | 4.57 | -- | -- | -- | -- |
| 329.52 | 0.845 | 6.15 | -- | -- | -1.28 | -- | -- | 1.36 | -- | 30 | 36142 | -- | -- |
| 405.82 | 0.94 | 6.26 | -- | -- | -- | -- | -- | 0.835 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 269.06 | temperature | 30 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 3 | 270.47 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 7 |
| 5 | 270.54 | temperature | 30 | 4320 | < th | dose independent | rect. | 2 | 10 |
| 8 | 270.57 | temperature | 30 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 13 | 270.96 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 14 |
| 20 | 271.40 | temperature | 30 | 14400 | < th | dose independent | rect. | 19 | 14 |
| 23 | 271.82 | temperature | 30 | 14400 | < th | dose independent | rect. | 23 | 10 |
| 24 | 271.84 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 4 |
| 40 | 271.98 | temperature | 30 | 14400 | < th | dose independent | rect. | 3 | 6 |
| 43 | 272.01 | temperature | 30 | 14400 | < th | dose independent | rect. | 1 | 8 |
| 54 | 272.23 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 61 | 272.37 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 112 | 273.41 | temperature | 30 | 4320 | < th | dose independent | sin | 8 | NA |
| 114 | 273.47 | temperature | 30 | 4320 | > th | dose independent | sin | 8 | NA |
| 147 | 274.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 23 | 10 |
| 148 | 274.10 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 151 | 274.21 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 2 |
| 156 | 274.45 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 201 | 275.32 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 5 |
| 255 | 276.47 | temperature | 30 | 4320 | > th | dose dependent | sin | 7 | NA |
| 443 | 279.87 | temperature | 30 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 473 | 280.11 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 591 | 281.09 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 10 |
| 627 | 281.22 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 629 | 281.24 | temperature | 25 | 4320 | > th | dose dependent | rect. | 22 | 4 |
| 631 | 281.31 | temperature | 30 | 4320 | < th | dose independent | rect. | 5 | 13 |
| 636 | 281.34 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 9 |
| 637 | 281.34 | temperature | 30 | 4320 | > th | dose dependent | no | NA | NA |
| 781 | 281.41 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 20 |
| 832 | 281.84 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 897 | 282.29 | temperature | 30 | 4320 | > th | dose independent | no | NA | NA |