FiT-DB / Search/ Help/ Sample detail
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Os06g0184700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Canalicular multispecific organic anion transporter 1 (ATP-binding cassette, sub-family C, member 2) (Multidrug resistance-associated protein 2) (Canalicular multidrug resistance protein).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.38 | 0.337 | 10.7 | -0.286 | 0.747 | 0.847 | -0.394 | -0.952 | 0.127 | 19.3 | 29.7 | 1861 | -- | -- |
| 51.66 | 0.335 | 10.7 | -0.457 | 0.722 | 0.794 | -0.426 | -- | 0.123 | 19.3 | 29.6 | 1873 | -- | -- |
| 51.77 | 0.335 | 10.7 | -0.284 | 0.757 | 0.866 | -- | -0.944 | 0.127 | 19.3 | 29.7 | 1910 | -- | -- |
| 51.76 | 0.335 | 10.7 | -0.455 | 0.762 | 0.766 | -- | -- | 0.158 | 19.3 | 29.39 | 1898 | -- | -- |
| 76.64 | 0.408 | 10.7 | -0.241 | -- | 0.735 | -- | -0.861 | 0.0711 | -- | 29.8 | 3005 | -- | -- |
| 68.74 | 0.389 | 10.7 | -0.655 | 0.648 | -- | -0.474 | -- | 0.114 | 19.3 | -- | -- | -- | -- |
| 69.34 | 0.39 | 10.7 | -0.646 | 0.646 | -- | -- | -- | 0.113 | 19.3 | -- | -- | -- | -- |
| 74.11 | 0.401 | 10.7 | -0.422 | -- | 0.631 | -- | -- | 0.166 | -- | 29.2 | 5702 | -- | -- |
| 56.95 | 0.351 | 10.7 | -- | 0.753 | 0.826 | -- | -- | 0.187 | 19.3 | 29.3 | 1871 | -- | -- |
| 91.54 | 0.447 | 10.7 | -0.656 | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
| 80.32 | 0.419 | 10.7 | -- | 0.652 | -- | -- | -- | 0.185 | 19.3 | -- | -- | -- | -- |
| 79 | 0.414 | 10.7 | -- | -- | 0.671 | -- | -- | 0.13 | -- | 29.5 | 5698 | -- | -- |
| 102.91 | 0.473 | 10.7 | -- | -- | -- | -- | -- | 0.175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.26 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 3 | 51.37 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 2 |
| 9 | 51.66 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 16 | 51.69 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 12 |
| 39 | 51.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 40 | 51.78 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 16 |
| 42 | 51.80 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 17 |
| 54 | 51.85 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 2 |
| 87 | 51.96 | temperature | 25 | 1440 | > th | dose dependent | sin | 15 | NA |
| 97 | 51.97 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 12 |
| 200 | 52.21 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 1 |
| 208 | 52.26 | temperature | 30 | 270 | < th | dose independent | rect. | 7 | 20 |
| 216 | 52.33 | temperature | 30 | 1440 | < th | dose independent | sin | 16 | NA |
| 231 | 52.37 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 17 |
| 291 | 52.49 | temperature | 30 | 1440 | > th | dose independent | sin | 16 | NA |
| 300 | 52.51 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 303 | 52.53 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 309 | 52.56 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 312 | 52.57 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 354 | 52.65 | wind | 7 | 43200 | > th | dose independent | rect. | 4 | 10 |
| 393 | 52.69 | wind | 7 | 43200 | > th | dose independent | rect. | 2 | 12 |
| 436 | 52.72 | wind | 7 | 43200 | < th | dose independent | rect. | 5 | 9 |
| 439 | 52.72 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 14 |
| 452 | 52.75 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 457 | 52.77 | temperature | 25 | 1440 | > th | dose dependent | rect. | 1 | 21 |
| 492 | 52.80 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 511 | 52.82 | wind | 7 | 43200 | > th | dose independent | sin | 5 | NA |
| 515 | 52.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 534 | 52.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 536 | 52.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 558 | 52.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 582 | 52.85 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 588 | 52.85 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 14 |
| 636 | 52.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 20 |
| 752 | 52.93 | wind | 7 | 43200 | < th | dose independent | sin | 5 | NA |
| 765 | 52.94 | wind | 5 | 43200 | > th | dose dependent | rect. | 3 | 12 |
| 769 | 52.96 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 773 | 52.98 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 802 | 53.03 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 975 | 53.10 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 994 | 53.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 5 |
