Os06g0184200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0184200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.71 | 0.597 | 8.86 | 1.05 | 0.703 | 2.37 | 0.333 | 0.406 | -0.175 | 10.3 | 25 | 1496 | -- | -- |
| 161.88 | 0.593 | 8.86 | 1.12 | 0.708 | 2.34 | 0.355 | -- | -0.166 | 10.4 | 25.1 | 1501 | -- | -- |
| 162.12 | 0.593 | 8.86 | 1.07 | 0.713 | 2.38 | -- | 0.403 | -0.173 | 10.5 | 25 | 1534 | -- | -- |
| 161.03 | 0.591 | 8.85 | 1.21 | 0.569 | 2.13 | -- | -- | -0.125 | 11 | 24.96 | 2064 | -- | -- |
| 174.4 | 0.615 | 8.86 | 1.05 | -- | 2.38 | -- | 0.246 | -0.142 | -- | 25.71 | 826 | -- | -- |
| 234.09 | 0.717 | 8.96 | 0.415 | 0.714 | -- | 0.361 | -- | -0.649 | 10.6 | -- | -- | -- | -- |
| 234.6 | 0.717 | 8.96 | 0.43 | 0.711 | -- | -- | -- | -0.648 | 10.8 | -- | -- | -- | -- |
| 174.48 | 0.615 | 8.86 | 1.1 | -- | 2.37 | -- | -- | -0.13 | -- | 25.8 | 836 | -- | -- |
| 191.75 | 0.645 | 8.88 | -- | 0.753 | 1.75 | -- | -- | -0.308 | 10.3 | 25.4 | 1500 | -- | -- |
| 265.87 | 0.762 | 8.98 | 0.416 | -- | -- | -- | -- | -0.652 | -- | -- | -- | -- | -- |
| 239.48 | 0.724 | 8.97 | -- | 0.708 | -- | -- | -- | -0.696 | 10.7 | -- | -- | -- | -- |
| 202.58 | 0.663 | 8.91 | -- | -- | 1.91 | -- | -- | -0.339 | -- | 25.8 | 809 | -- | -- |
| 270.42 | 0.768 | 8.99 | -- | -- | -- | -- | -- | -0.698 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 155.57 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 14 | 156.27 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 23 | 156.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 46 | 156.91 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 58 | 157.03 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 65 | 157.12 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 125 | 157.92 | temperature | 25 | 1440 | < th | dose dependent | sin | 11 | NA |
| 154 | 158.33 | temperature | 20 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 207 | 159.30 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 427 | 161.85 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 451 | 162.00 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 655 | 163.29 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 715 | 163.52 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 720 | 163.55 | temperature | 20 | 4320 | < th | dose independent | rect. | 17 | 11 |
| 751 | 163.65 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 815 | 163.95 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 829 | 164.00 | temperature | 20 | 4320 | > th | dose independent | sin | 14 | NA |
| 837 | 164.01 | temperature | 20 | 4320 | > th | dose independent | rect. | 16 | 12 |
| 849 | 164.07 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 855 | 164.08 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 862 | 164.10 | temperature | 20 | 4320 | > th | dose independent | rect. | 15 | 16 |
| 864 | 164.10 | temperature | 15 | 1440 | > th | dose dependent | sin | 10 | NA |