Os06g0183700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0183700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.02 | 0.54 | 7.79 | -1.27 | 3.46 | 1.85 | 0.0121 | -0.626 | -0.0716 | 15.7 | 19.74 | 748 | 8.48 | -- |
| 132.11 | 0.535 | 7.79 | -1.14 | 3.43 | 1.83 | 0.0626 | -- | -0.0427 | 15.7 | 19.69 | 772 | 8.9 | -- |
| 131.8 | 0.535 | 7.79 | -1.25 | 3.4 | 1.81 | -- | -0.497 | -0.0539 | 15.6 | 20 | 783 | 8.98 | -- |
| 132.05 | 0.535 | 7.78 | -1.15 | 3.4 | 1.8 | -- | -- | -0.0249 | 15.6 | 19.82 | 784 | 9.14 | -- |
| 290.83 | 0.794 | 7.88 | -2.78 | -- | 3.03 | -- | 0.83 | -0.689 | -- | -28.56 | 1874 | 17.7 | -- |
| 187.58 | 0.642 | 7.72 | -0.767 | 2.7 | -- | -0.0725 | -- | 0.238 | 16.1 | -- | -- | -- | -- |
| 187.59 | 0.641 | 7.72 | -0.768 | 2.7 | -- | -- | -- | 0.237 | 16.1 | -- | -- | -- | -- |
| 167.59 | 0.603 | 7.73 | -1.19 | -- | 3.64 | -- | -- | 0.0224 | -- | -53.97 | 2048 | 19.2 | -- |
| 163.83 | 0.596 | 7.73 | -- | 3.19 | 1.39 | -- | -- | 0.157 | 15.7 | 21.15 | 787 | 9.22 | -- |
| 582.97 | 1.13 | 7.71 | -0.877 | -- | -- | -- | -- | 0.165 | -- | -- | -- | -- | -- |
| 203.14 | 0.667 | 7.7 | -- | 2.71 | -- | -- | -- | 0.323 | 16.1 | -- | -- | -- | -- |
| 191.01 | 0.644 | 7.7 | -- | -- | 3.45 | -- | -- | 0.207 | -- | -274.8 | 1564 | 15 | -- |
| 603.28 | 1.15 | 7.69 | -- | -- | -- | -- | -- | 0.263 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 127.32 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 10 |
| 2 | 127.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 1 |
| 3 | 128.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 3 |
| 4 | 129.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 8 | 130.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 25 | 132.44 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 40 | 133.29 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 15 |
| 50 | 133.67 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 1 |
| 57 | 133.92 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 58 | 134.04 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 2 |
| 101 | 135.61 | temperature | 30 | 720 | < th | dose independent | rect. | 18 | 9 |
| 136 | 136.59 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 13 |
| 139 | 136.64 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 184 | 137.51 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 13 |
| 189 | 137.60 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 197 | 137.81 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 212 | 138.05 | temperature | 30 | 720 | < th | dose dependent | sin | 15 | NA |
| 235 | 138.70 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 270 | 139.10 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 5 |
| 272 | 139.11 | temperature | 25 | 720 | < th | dose independent | rect. | 16 | 7 |
| 336 | 140.54 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 10 |
| 350 | 140.78 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 13 |
| 352 | 140.80 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 476 | 142.54 | temperature | 30 | 720 | < th | dose independent | rect. | 16 | 14 |
| 519 | 143.09 | temperature | 30 | 720 | > th | dose independent | rect. | 17 | 2 |
| 585 | 143.73 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 592 | 143.83 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 612 | 143.99 | humidity | 60 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 639 | 144.37 | radiation | 10 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 725 | 145.26 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 10 |
| 752 | 145.91 | temperature | 25 | 720 | > th | dose independent | sin | 17 | NA |
| 765 | 146.16 | temperature | 25 | 720 | < th | dose independent | sin | 17 | NA |
| 844 | 146.66 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 878 | 146.95 | wind | 5 | 43200 | > th | dose independent | rect. | 12 | 17 |
| 907 | 147.11 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 17 |
| 917 | 147.19 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 953 | 147.41 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 956 | 147.42 | wind | 5 | 43200 | < th | dose independent | rect. | 12 | 3 |
| 972 | 147.52 | wind | 5 | 43200 | < th | dose independent | rect. | 7 | 11 |
| 992 | 147.67 | wind | 5 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 1000 | 147.69 | wind | 5 | 43200 | > th | dose independent | rect. | 7 | 12 |