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Os06g0177700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : 2OG-Fe(II) oxygenase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.71 (0.0338) R2 : 0.655
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -2.09 (0.0711) R2dN8 : 0.846 R2N8 : 0.655
σ : 0.636
deviance : 185.78
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
155.42 0.586 6.83 0.264 0.505 0.96 -0.616 6.07 -2.18 17.9 9.584 4165 -- --
162.41 0.594 6.76 0.149 0.436 0.62 -0.833 -- -2.26 17.4 10.32 20235 -- --
156.12 0.582 6.84 0.263 0.511 1.01 -- 6.45 -2.19 18 9.347 4164 -- --
162.77 0.594 6.76 0.122 0.489 0.669 -- -- -2.26 17.6 10.3 20236 -- --
168.69 0.605 6.81 0.207 -- 1.12 -- 7 -2.16 -- 9.3 4008 -- --
173.28 0.617 6.72 0.00399 0.477 -- -0.579 -- -2.08 17.4 -- -- -- --
174.11 0.618 6.72 0.00547 0.474 -- -- -- -2.08 17.5 -- -- -- --
172.32 0.611 6.74 0.0678 -- 1.01 -- -- -2.23 -- 11.48 8263 -- --
163.05 0.595 6.76 -- 0.458 0.8 -- -- -2.32 17.6 10.41 20236 -- --
185.78 0.637 6.71 -0.0102 -- -- -- -- -2.09 -- -- -- -- --
174.11 0.617 6.72 -- 0.474 -- -- -- -2.08 17.5 -- -- -- --
172.06 0.611 6.74 -- -- 0.944 -- -- -2.15 -- 11.5 8263 -- --
185.78 0.636 6.71 -- -- -- -- -- -2.09 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 154.88 humidity 60.0 4320 < th dose independent rect. 16 4
17 155.53 humidity 60.0 4320 > th dose independent rect. 16 11
19 155.56 humidity 60.0 4320 > th dose independent rect. 16 16
20 155.57 humidity 60.0 4320 > th dose independent rect. 16 9
22 155.58 humidity 60.0 4320 > th dose independent rect. 16 4
30 155.61 humidity 70.0 4320 < th dose dependent rect. 17 15
32 155.72 humidity 70.0 4320 < th dose dependent rect. 17 4
46 156.03 humidity 60.0 4320 > th dose independent rect. 17 1
47 156.12 humidity 60.0 4320 < th dose dependent rect. 15 19
50 156.38 wind 9.0 4320 > th dose dependent sin 13 NA
52 156.42 humidity 60.0 4320 < th dose dependent sin 12 NA
53 156.43 humidity 60.0 4320 < th dose dependent rect. 15 3
68 156.53 precipitation 0.1 1440 < th dose independent rect. 15 5
69 156.53 precipitation 0.1 1440 < th dose dependent rect. 15 5
72 156.63 wind 9.0 4320 > th dose dependent rect. 15 15
88 156.86 precipitation 0.1 1440 > th dose dependent rect. 14 7
101 156.96 precipitation 0.1 1440 > th dose independent rect. 15 5
106 157.00 precipitation 0.1 1440 > th dose dependent sin 19 NA
108 157.01 precipitation 0.1 1440 > th dose dependent rect. 10 11
134 157.21 wind 9.0 4320 > th dose independent sin 13 NA
136 157.23 wind 9.0 4320 < th dose independent rect. 16 19
145 157.32 precipitation 0.1 1440 > th dose dependent rect. 14 13
153 157.48 wind 9.0 43200 > th dose dependent rect. 20 1
156 157.50 wind 9.0 4320 > th dose independent rect. 17 12
158 157.52 wind 9.0 4320 < th dose independent sin 13 NA
159 157.52 humidity 60.0 4320 < th dose independent sin 12 NA
160 157.52 wind 9.0 4320 < th dose independent rect. 16 14
168 157.57 precipitation 0.1 1440 > th dose dependent rect. 10 17
176 157.64 precipitation 0.1 1440 > th dose dependent rect. 13 5
240 157.87 atmosphere 995.0 43200 > th dose independent rect. 15 4
244 157.88 humidity 50.0 4320 > th dose independent sin 11 NA
251 157.89 wind 9.0 4320 > th dose dependent rect. 16 22
256 157.92 wind 9.0 4320 > th dose independent rect. 16 19
270 158.01 wind 9.0 4320 > th dose dependent rect. 16 6
278 158.03 atmosphere 995.0 43200 < th dose independent rect. 15 4
297 158.06 humidity 90.0 10 > th dose independent rect. 2 7
304 158.10 wind 9.0 4320 < th dose independent rect. 16 6
314 158.15 humidity 50.0 4320 > th dose independent rect. 15 20
393 158.46 atmosphere 995.0 43200 < th dose dependent rect. 15 7
418 158.53 humidity 90.0 10 > th dose independent rect. 2 12
425 158.53 wind 1.0 14400 < th dose dependent rect. 19 3
437 158.58 atmosphere 995.0 43200 > th dose independent rect. 14 8
453 158.61 wind 9.0 4320 > th dose dependent rect. 16 2
467 158.66 humidity 50.0 4320 < th dose independent rect. 15 22
515 158.80 atmosphere 1005.0 4320 > th dose independent rect. 8 1
521 158.82 wind 9.0 4320 > th dose independent rect. 17 6
525 158.83 wind 9.0 4320 > th dose independent rect. 17 9
539 158.87 wind 5.0 30 < th dose dependent rect. 2 8
548 158.92 radiation 20.0 270 > th dose independent rect. 16 1
566 158.94 humidity 50.0 4320 > th dose independent rect. 12 5
599 159.06 atmosphere 1000.0 4320 < th dose independent rect. 12 1
611 159.09 atmosphere 1000.0 4320 > th dose independent rect. 19 1
615 159.10 atmosphere 1000.0 4320 < th dose independent rect. 19 1
617 159.11 atmosphere 995.0 43200 < th dose independent rect. 14 8
640 159.16 atmosphere 1000.0 4320 > th dose independent rect. 12 1
645 159.17 humidity 50.0 4320 < th dose independent rect. 11 6
676 159.22 humidity 90.0 30 < th dose independent rect. 21 10
714 159.30 atmosphere 1005.0 4320 < th dose independent rect. 8 1
720 159.31 atmosphere 1005.0 4320 > th dose independent rect. 8 4
764 159.38 wind 1.0 14400 > th dose independent rect. 21 1
788 159.41 wind 9.0 4320 > th dose dependent rect. 11 21
796 159.43 atmosphere 1005.0 4320 < th dose independent rect. 8 4
837 159.52 wind 3.0 30 < th dose dependent rect. 2 4
841 159.53 humidity 50.0 4320 > th dose independent rect. 23 18
845 159.54 humidity 50.0 4320 > th dose independent rect. 7 10
888 159.57 wind 7.0 4320 > th dose independent rect. 13 17
890 159.57 humidity 50.0 4320 > th dose independent rect. 19 22
891 159.57 radiation 10.0 270 > th dose dependent rect. 16 2
933 159.61 atmosphere 1010.0 10 < th dose independent rect. 2 8
934 159.61 humidity 50.0 4320 > th dose independent rect. 7 20
944 159.63 wind 1.0 14400 < th dose independent rect. 20 2
948 159.63 humidity 50.0 4320 > th dose independent rect. 2 15
949 159.63 humidity 50.0 4320 > th dose independent rect. 7 18