Os06g0176700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0176700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.12 | 0.497 | 14.1 | -0.87 | 1.41 | 1.08 | -0.478 | -12.7 | 0.104 | 21.4 | 29.76 | 1735 | -- | -- |
| 128.1 | 0.527 | 13.8 | 0.914 | 1.43 | 0.547 | -0.572 | -- | 0.302 | 21.2 | 14.3 | 47520 | -- | -- |
| 112.88 | 0.495 | 14.1 | -0.875 | 1.41 | 1.1 | -- | -13 | 0.102 | 21.4 | 29.73 | 1760 | -- | -- |
| 129.3 | 0.53 | 13.8 | 0.951 | 1.43 | 0.538 | -- | -- | 0.309 | 21.2 | 14.3 | 47520 | -- | -- |
| 218.25 | 0.688 | 14.1 | -1.26 | -- | 1.45 | -- | -13 | -0.0335 | -- | 29.6 | 2254 | -- | -- |
| 132.15 | 0.539 | 13.8 | 1.39 | 1.43 | -- | -0.579 | -- | 0.439 | 21.2 | -- | -- | -- | -- |
| 133.33 | 0.541 | 13.8 | 1.41 | 1.43 | -- | -- | -- | 0.439 | 21.2 | -- | -- | -- | -- |
| 246.94 | 0.732 | 13.8 | 0.919 | -- | 0.58 | -- | -- | 0.291 | -- | 14.4 | 47520 | -- | -- |
| 136.09 | 0.543 | 13.9 | -- | 1.42 | 1.2 | -- | -- | 0.0575 | 21.2 | 16.5 | 47520 | -- | -- |
| 251.62 | 0.741 | 13.7 | 1.42 | -- | -- | -- | -- | 0.432 | -- | -- | -- | -- | -- |
| 185.89 | 0.638 | 13.8 | -- | 1.43 | -- | -- | -- | 0.282 | 21.3 | -- | -- | -- | -- |
| 253.21 | 0.741 | 13.8 | -- | -- | 1.21 | -- | -- | 0.0457 | -- | 16.42 | 47520 | -- | -- |
| 304.57 | 0.815 | 13.8 | -- | -- | -- | -- | -- | 0.275 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 112.82 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 2 | 114.03 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 2 |
| 3 | 114.17 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 2 |
| 4 | 114.17 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 2 |
| 5 | 114.22 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 10 | 21 |
| 7 | 114.61 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 8 | 114.62 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 25 | 114.80 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 20 |
| 26 | 114.81 | humidity | 60.0 | 270 | > th | dose independent | rect. | 11 | 6 |
| 29 | 114.91 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 31 | 114.97 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 33 | 114.99 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 23 | 16 |
| 34 | 115.00 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 42 | 115.03 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 11 |
| 47 | 115.04 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 50 | 115.06 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 12 |
| 62 | 115.16 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 63 | 115.17 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 64 | 115.17 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 6 | 22 |
| 71 | 115.18 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 78 | 115.19 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 23 |
| 79 | 115.20 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 97 | 115.23 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 15 | NA |
| 101 | 115.23 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 132 | 115.29 | humidity | 60.0 | 270 | > th | dose independent | rect. | 12 | 3 |
| 133 | 115.29 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 24 | 9 |
| 169 | 115.36 | temperature | 25.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 206 | 115.44 | temperature | 30.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 220 | 115.46 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 12 | 19 |
| 230 | 115.50 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 24 | 11 |
| 253 | 115.53 | temperature | 30.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 314 | 115.67 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 1 | 8 |
| 361 | 115.76 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 371 | 115.81 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 380 | 115.83 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 388 | 115.85 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 392 | 115.86 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 411 | 115.91 | radiation | 40.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 421 | 115.92 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 422 | 115.93 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 3 | 5 |
| 431 | 115.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 475 | 116.00 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 12 | 22 |
| 477 | 116.01 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 504 | 116.10 | humidity | 60.0 | 270 | > th | dose independent | rect. | 13 | 1 |
| 519 | 116.16 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 524 | 116.16 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 12 | 20 |
| 537 | 116.19 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 9 | NA |
| 541 | 116.20 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 6 |
| 561 | 116.22 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 572 | 116.23 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 593 | 116.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 5 |
| 605 | 116.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 609 | 116.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 5 |
| 610 | 116.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 644 | 116.36 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 17 |
| 646 | 116.36 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 11 | 6 |
| 652 | 116.37 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 9 | 20 |
| 655 | 116.38 | temperature | 30.0 | 1440 | > th | dose independent | no | NA | NA |
| 798 | 116.43 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 4 | 22 |
| 822 | 116.45 | temperature | 30.0 | 1440 | < th | dose independent | no | NA | NA |
| 839 | 116.45 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 851 | 116.46 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 867 | 116.46 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 910 | 116.49 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 2 |
| 923 | 116.51 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 3 |
| 968 | 116.59 | humidity | 60.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 996 | 116.64 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 13 | 23 |