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Os06g0176600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to flagelliform silk protein-like protein [Oryza sativa (japonica cultivar-group)].


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0219) R2 : 0.841
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -2.27 (0.0462) R2dN8 : 1.09 R2N8 : 0.841
σ : 0.413
deviance : 78.3
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
47.3 0.323 12.5 0.771 0.552 0.385 0.67 -0.668 -2.09 19.9 18.81 1272 -- --
48.36 0.324 12.5 0.767 0.559 0.375 0.693 -- -2.1 19.9 18.8 1265 -- --
48.45 0.324 12.5 0.773 0.546 0.397 -- -0.738 -2.09 19.8 18.79 1207 -- --
50.09 0.33 12.5 0.702 0.531 0.359 -- -- -2.12 19.8 18.79 1264 -- --
64.3 0.373 12.5 0.698 -- 0.277 -- -0.403 -2.15 -- 27.84 2894 -- --
52.89 0.341 12.5 0.668 0.491 -- 0.756 -- -2.19 19.5 -- -- -- --
54.41 0.345 12.5 0.652 0.495 -- -- -- -2.19 19.3 -- -- -- --
64.59 0.374 12.5 0.641 -- 0.256 -- -- -2.17 -- 28.31 2928 -- --
59.26 0.359 12.5 -- 0.515 0.386 -- -- -2.13 19.9 20 28593 -- --
67.4 0.384 12.5 0.643 -- -- -- -- -2.2 -- -- -- -- --
65.6 0.379 12.5 -- 0.489 -- -- -- -2.26 19.4 -- -- -- --
69.5 0.388 12.5 -- -- 0.573 -- -- -2.35 -- 49.53 47520 -- --
78.3 0.413 12.5 -- -- -- -- -- -2.27 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.03 temperature 25.0 270 < th dose independent rect. 1 8
2 41.18 temperature 30.0 270 < th dose dependent rect. 1 8
3 41.35 temperature 30.0 90 < th dose dependent rect. 3 8
5 41.68 temperature 25.0 90 < th dose independent rect. 3 8
21 43.37 temperature 10.0 270 > th dose dependent rect. 21 16
39 43.90 temperature 20.0 270 > th dose independent rect. 21 16
51 44.15 radiation 10.0 270 > th dose independent rect. 16 1
67 44.39 radiation 1.0 270 > th dose dependent rect. 16 14
70 44.41 temperature 10.0 30 > th dose dependent rect. 21 19
71 44.42 humidity 90.0 270 < th dose independent rect. 6 8
78 44.54 temperature 10.0 10 > th dose dependent rect. 23 17
108 44.65 wind 1.0 270 < th dose independent rect. 4 2
112 44.67 temperature 10.0 43200 > th dose independent rect. 9 8
115 44.68 temperature 25.0 30 > th dose independent rect. 16 5
126 44.75 humidity 60.0 90 > th dose dependent rect. 3 8
155 44.97 temperature 10.0 30 > th dose dependent rect. 6 10
168 45.04 radiation 1.0 270 > th dose independent rect. 6 9
169 45.04 atmosphere 1000.0 30 > th dose dependent rect. 16 5
173 45.06 humidity 50.0 270 > th dose dependent rect. 1 9
182 45.10 temperature 10.0 30 > th dose dependent rect. 8 8
184 45.11 humidity 70.0 90 > th dose independent rect. 3 8
186 45.11 wind 7.0 30 < th dose independent rect. 16 16
190 45.13 wind 3.0 270 < th dose dependent rect. 4 2
197 45.16 temperature 20.0 270 > th dose dependent sin 8 NA
198 45.18 temperature 20.0 270 < th dose independent rect. 3 2
222 45.30 atmosphere 1010.0 30 < th dose independent rect. 16 16
235 45.34 radiation 40.0 270 < th dose dependent rect. 1 9
237 45.35 wind 5.0 90 < th dose dependent rect. 3 7
240 45.36 temperature 10.0 270 > th dose dependent rect. 6 8
247 45.39 temperature 15.0 270 > th dose independent rect. 6 9
257 45.43 atmosphere 995.0 30 > th dose independent rect. 8 8
259 45.43 radiation 40.0 270 < th dose independent rect. 1 9
266 45.44 temperature 20.0 30 > th dose independent rect. 8 8
279 45.49 wind 7.0 270 < th dose independent rect. 15 15
286 45.51 wind 7.0 270 < th dose dependent rect. 1 7
294 45.54 wind 1.0 30 > th dose independent rect. 8 8
295 45.54 temperature 10.0 1440 > th dose independent rect. 9 8
299 45.54 precipitation 0.1 30 < th dose independent rect. 8 8
300 45.54 temperature 10.0 1440 > th dose independent rect. 17 16
303 45.54 precipitation 0.1 30 < th dose dependent rect. 8 8
304 45.55 temperature 10.0 30 > th dose independent rect. 8 8
306 45.55 atmosphere 1015.0 30 < th dose independent rect. 8 8
307 45.55 temperature 10.0 30 > th dose independent rect. 16 16
319 45.59 wind 9.0 30 < th dose independent rect. 8 8
324 45.60 humidity 50.0 30 > th dose independent rect. 16 16
339 45.64 atmosphere 1000.0 270 > th dose dependent rect. 14 5
342 45.66 temperature 25.0 270 > th dose independent rect. 14 5
346 45.67 wind 3.0 270 < th dose independent rect. 2 4
347 45.67 wind 5.0 270 < th dose independent rect. 1 7
348 45.67 radiation 40.0 90 < th dose independent rect. 3 8
362 45.69 wind 9.0 90 < th dose independent rect. 3 18
365 45.70 precipitation 0.1 90 < th dose independent rect. 21 6
368 45.70 atmosphere 1015.0 90 < th dose dependent rect. 3 6
369 45.70 precipitation 0.1 90 < th dose dependent rect. 21 6
374 45.71 humidity 50.0 90 > th dose dependent rect. 21 6
379 45.72 atmosphere 995.0 270 > th dose independent rect. 6 9
380 45.72 radiation 1.0 270 > th dose dependent rect. 16 1
386 45.73 precipitation 0.1 270 < th dose independent rect. 6 9
391 45.73 precipitation 0.1 270 < th dose dependent rect. 6 9
399 45.75 atmosphere 1015.0 270 < th dose dependent rect. 1 7
401 45.77 temperature 15.0 90 > th dose independent rect. 21 6
402 45.77 radiation 40.0 30 < th dose independent rect. 16 16
405 45.78 temperature 30.0 90 < th dose independent rect. 21 6
406 45.78 humidity 50.0 90 > th dose independent rect. 21 6
409 45.78 atmosphere 995.0 90 > th dose independent rect. 21 6
410 45.78 radiation 1.0 90 < th dose independent rect. 21 6
415 45.78 temperature 10.0 90 > th dose independent rect. 3 18
416 45.78 atmosphere 1015.0 90 < th dose independent rect. 3 18
418 45.78 radiation 1.0 90 < th dose dependent rect. 21 6
423 45.79 wind 9.0 90 < th dose independent rect. 21 6
426 45.79 atmosphere 1015.0 270 < th dose independent rect. 6 9
427 45.79 temperature 10.0 270 > th dose independent rect. 15 15
429 45.80 atmosphere 1010.0 270 < th dose independent rect. 1 7
430 45.80 radiation 40.0 270 < th dose independent rect. 15 15
431 45.80 radiation 40.0 90 < th dose independent rect. 3 18
446 45.83 radiation 40.0 90 < th dose dependent rect. 3 7
455 45.84 atmosphere 1010.0 30 < th dose independent rect. 3 5
462 45.86 wind 7.0 30 < th dose independent rect. 16 5
468 45.87 atmosphere 995.0 30 > th dose independent rect. 16 16
470 45.88 precipitation 0.1 270 < th dose independent rect. 15 15
479 45.88 precipitation 0.1 270 < th dose dependent rect. 15 15
480 45.89 wind 9.0 270 < th dose independent rect. 6 9
483 45.90 wind 1.0 270 > th dose independent rect. 6 8
484 45.90 precipitation 0.1 30 < th dose independent rect. 16 16
486 45.90 temperature 10.0 30 > th dose dependent rect. 16 5
489 45.90 precipitation 0.1 30 < th dose dependent rect. 16 16
509 45.94 precipitation 0.1 90 < th dose independent rect. 3 18
512 45.94 precipitation 0.1 90 < th dose dependent rect. 3 18
513 45.95 atmosphere 1005.0 270 > th dose independent rect. 14 5
519 45.96 humidity 90.0 30 < th dose independent rect. 8 8
527 45.97 wind 7.0 270 < th dose independent rect. 13 8
567 46.02 temperature 30.0 270 < th dose dependent sin 7 NA
611 46.06 humidity 90.0 270 > th dose dependent rect. 2 16
612 46.07 wind 1.0 270 > th dose independent rect. 20 18
614 46.07 temperature 15.0 10 > th dose dependent rect. 16 7
616 46.08 wind 3.0 270 > th dose independent rect. 14 6
646 46.11 wind 3.0 270 > th dose independent rect. 13 8
652 46.11 temperature 10.0 270 > th dose dependent rect. 13 8
667 46.13 humidity 60.0 10 > th dose dependent rect. 3 9
721 46.18 humidity 50.0 270 > th dose independent rect. 21 16
722 46.18 atmosphere 995.0 270 > th dose independent rect. 8 17
729 46.19 radiation 40.0 30 < th dose independent rect. 16 18
738 46.20 temperature 10.0 270 > th dose independent rect. 19 7
739 46.20 temperature 30.0 270 < th dose independent rect. 19 7
740 46.20 humidity 50.0 270 > th dose independent rect. 19 7
742 46.20 atmosphere 995.0 270 > th dose independent rect. 19 7
743 46.20 radiation 1.0 270 < th dose independent rect. 19 7
761 46.20 atmosphere 995.0 30 > th dose independent rect. 21 19
766 46.20 radiation 1.0 270 < th dose dependent rect. 19 7
773 46.21 temperature 25.0 270 < th dose independent sin 6 NA
776 46.21 humidity 50.0 270 > th dose independent rect. 6 8
791 46.22 radiation 1.0 270 < th dose dependent rect. 3 8
795 46.23 wind 9.0 270 < th dose independent rect. 19 7
796 46.23 precipitation 0.1 270 < th dose independent rect. 19 7
800 46.23 precipitation 0.1 270 < th dose dependent rect. 19 7
818 46.25 temperature 15.0 270 > th dose independent rect. 8 17
865 46.27 humidity 50.0 270 > th dose independent rect. 14 16
878 46.28 wind 5.0 30 < th dose independent rect. 3 7
880 46.28 precipitation 0.1 10 < th dose independent rect. 4 17
897 46.28 precipitation 0.1 10 < th dose dependent rect. 4 17
907 46.30 atmosphere 1015.0 270 < th dose dependent rect. 3 3
914 46.31 temperature 20.0 30 > th dose independent rect. 6 10
924 46.32 temperature 25.0 270 > th dose independent sin 7 NA
937 46.32 precipitation 0.1 270 < th dose independent rect. 1 7
945 46.32 temperature 20.0 720 > th dose dependent rect. 22 7
951 46.32 precipitation 0.1 270 < th dose dependent rect. 1 7
963 46.33 humidity 90.0 30 < th dose independent rect. 6 10
972 46.34 radiation 1.0 30 > th dose independent rect. 8 8
978 46.35 humidity 70.0 270 > th dose independent rect. 1 9
983 46.35 atmosphere 1000.0 270 > th dose dependent rect. 16 1
988 46.36 atmosphere 1010.0 10 < th dose independent rect. 3 7
995 46.37 temperature 10.0 270 > th dose independent rect. 1 7
998 46.37 humidity 50.0 270 > th dose independent rect. 1 7
1000 46.37 humidity 60.0 10 > th dose independent rect. 3 7