Os06g0174700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0174700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1338.47 | 1.72 | 8.41 | -2.68 | 2.6 | -7.51 | 5.3 | -26.9 | -2.93 | 20.2 | 0.864 | 1423 | -- | -- |
| 1475.49 | 1.79 | 8.87 | -4.52 | 3.29 | -4.09 | 7.1 | -- | -3.49 | 22.7 | 9.763 | 1800 | -- | -- |
| 1342.78 | 1.71 | 8.35 | -2.82 | 2.13 | -7.55 | -- | -27.3 | -2.83 | 18.5 | 0.9002 | 1375 | -- | -- |
| 1642.66 | 1.89 | 8.85 | -4.98 | 3.44 | -4.44 | -- | -- | -3.44 | 23 | 8.056 | 1791 | -- | -- |
| 1511.81 | 1.81 | 8.38 | -3.16 | -- | -7.68 | -- | -27.3 | -2.93 | -- | 1.023 | 1322 | -- | -- |
| 1747.11 | 1.96 | 8.77 | -4.98 | 2.75 | -- | 6.73 | -- | -3.07 | 20.9 | -- | -- | -- | -- |
| 1888.79 | 2.04 | 8.77 | -5.19 | 2.82 | -- | -- | -- | -3.06 | 20.3 | -- | -- | -- | -- |
| 1669.73 | 1.9 | 8.89 | -5.66 | -- | -6.17 | -- | -- | -4 | -- | 4.599 | 2451 | -- | -- |
| 2329.86 | 2.25 | 8.86 | -- | 3.32 | -4.55 | -- | -- | -3.08 | 22.9 | 10.01 | 1808 | -- | -- |
| 2328.08 | 2.25 | 8.7 | -5.21 | -- | -- | -- | -- | -3.09 | -- | -- | -- | -- | -- |
| 2598.08 | 2.38 | 8.64 | -- | 2.85 | -- | -- | -- | -2.49 | 20.1 | -- | -- | -- | -- |
| 2304.48 | 2.24 | 8.89 | -- | -- | -6.13 | -- | -- | -3.95 | -- | 10 | 6710 | -- | -- |
| 3043.28 | 2.57 | 8.57 | -- | -- | -- | -- | -- | -2.52 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 1227.29 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 3 | 1236.30 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 4 | 1236.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 8 |
| 13 | 1246.28 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 14 | 1246.28 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 3 |
| 16 | 1246.69 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 36 | 1258.82 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 10 |
| 37 | 1259.24 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 5 |
| 41 | 1259.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 8 | 13 |
| 45 | 1262.90 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 49 | 1263.57 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 11 |
| 51 | 1264.20 | wind | 5.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 66 | 1268.41 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 72 | 1269.29 | wind | 5.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 93 | 1273.27 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 99 | 1274.56 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 102 | 1274.98 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 3 | 7 |
| 110 | 1276.51 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 111 | 1276.57 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 112 | 1276.67 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 17 |
| 137 | 1279.29 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 164 | 1282.58 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 6 |
| 165 | 1282.60 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 17 | 2 |
| 181 | 1284.38 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 186 | 1284.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 188 | 1285.10 | precipitation | 0.1 | 43200 | > th | dose dependent | sin | 20 | NA |
| 191 | 1285.39 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 230 | 1288.17 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 19 | 15 |
| 238 | 1288.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 17 |
| 248 | 1289.19 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 276 | 1291.02 | wind | 3.0 | 43200 | > th | dose dependent | sin | 5 | NA |
| 343 | 1294.59 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 19 | 17 |
| 442 | 1298.14 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 443 | 1298.14 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 448 | 1298.31 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 5 |
| 457 | 1298.42 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 19 | 18 |
| 465 | 1298.60 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 13 |
| 482 | 1299.02 | temperature | 10.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 536 | 1300.12 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 559 | 1300.73 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 594 | 1301.41 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 691 | 1303.56 | humidity | 80.0 | 43200 | < th | dose dependent | rect. | 3 | 5 |
| 697 | 1303.65 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 14 |
| 725 | 1304.11 | temperature | 30.0 | 14400 | < th | dose dependent | sin | 18 | NA |
| 738 | 1304.25 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 765 | 1304.56 | wind | 7.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 855 | 1306.08 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 2 |
| 860 | 1306.15 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 875 | 1306.38 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 890 | 1306.55 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 17 |
| 936 | 1307.09 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 965 | 1307.40 | temperature | 20.0 | 14400 | > th | dose independent | sin | 14 | NA |