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Os06g0166100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : FAR1 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.0111) R2 : 0.71
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.938 (0.0287) R2dC : 0.684 R2C : 0.664
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.175 (0.0232) R2dN8 : 0.0466 R2N8 : 0.026
σ : 0.208
deviance : 19.83
__
_____
C
peak time of C : 7.22
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
14.47 0.179 10.1 0.548 0.941 0.137 -0.207 -1.22 -0.029 7.19 19.2 4040 -- --
14.83 0.179 10.2 0.46 0.959 0.553 -0.162 -- -0.0682 7.13 16.6 9981 -- --
14.53 0.178 10.1 0.539 0.937 0.152 -- -1.24 -0.0293 7.2 19.19 3583 -- --
14.78 0.179 10.2 0.532 0.94 0.617 -- -- -0.0512 7.17 16.7 10627 -- --
44.62 0.311 10.2 0.951 -- 0.569 -- -1.29 0.0731 -- 25.8 520 -- --
18.99 0.204 10.2 0.175 0.936 -- -0.146 -- -0.156 7.23 -- -- -- --
19.05 0.204 10.2 0.172 0.936 -- -- -- -0.156 7.23 -- -- -- --
45.94 0.316 10.2 0.794 -- 0.681 -- -- 0.0981 -- 25.8 512 -- --
18.53 0.2 10.2 -- 0.922 0.302 -- -- -0.145 7.25 16.1 6148 -- --
65.44 0.378 10.2 0.189 -- -- -- -- -0.14 -- -- -- -- --
19.83 0.208 10.2 -- 0.938 -- -- -- -0.175 7.22 -- -- -- --
44.58 0.311 10.2 -- -- 0.615 -- -- 0.0151 -- 25.8 484 -- --
66.38 0.38 10.2 -- -- -- -- -- -0.161 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.26 radiation 30 14400 < th dose independent rect. 5 2
3 14.43 humidity 50 43200 < th dose independent rect. 9 3
4 14.43 humidity 50 43200 > th dose independent rect. 8 4
6 14.44 humidity 50 43200 < th dose independent rect. 11 1
14 14.45 radiation 30 14400 < th dose independent rect. 17 14
15 14.46 humidity 60 43200 < th dose independent rect. 8 1
42 14.49 temperature 15 270 > th dose dependent sin 9 NA
60 14.52 humidity 80 43200 > th dose independent rect. 4 5
64 14.52 temperature 20 4320 > th dose independent rect. 8 17
65 14.52 temperature 20 4320 > th dose independent rect. 5 19
66 14.52 temperature 20 4320 < th dose independent rect. 5 19
67 14.52 humidity 60 43200 < th dose dependent rect. 11 1
79 14.53 radiation 30 14400 < th dose independent rect. 21 10
87 14.53 temperature 20 4320 < th dose independent rect. 8 17
128 14.55 humidity 50 43200 > th dose independent sin 3 NA
130 14.55 humidity 50 43200 < th dose independent sin 3 NA
170 14.55 temperature 25 4320 < th dose dependent rect. 11 1
221 14.57 humidity 80 43200 < th dose independent rect. 24 10
225 14.57 temperature 20 4320 > th dose independent rect. 12 12
228 14.57 temperature 20 4320 > th dose independent rect. 11 14
287 14.58 wind 7 43200 > th dose dependent rect. 24 2
292 14.59 temperature 20 4320 > th dose independent sin 18 NA
299 14.59 radiation 30 14400 < th dose independent rect. 24 7
301 14.59 humidity 80 43200 > th dose independent rect. 1 9
312 14.59 temperature 20 4320 < th dose independent rect. 12 12
331 14.59 wind 5 43200 > th dose independent rect. 24 15
358 14.60 wind 9 43200 > th dose independent rect. 24 2
362 14.60 humidity 80 43200 < th dose independent rect. 3 6
375 14.60 temperature 20 270 > th dose independent rect. 21 13
405 14.60 wind 5 43200 < th dose independent rect. 23 16
497 14.61 temperature 20 4320 < th dose independent sin 18 NA
499 14.61 humidity 50 43200 > th dose independent no NA NA
512 14.61 humidity 70 43200 > th dose independent rect. 18 9
619 14.61 temperature 25 4320 < th dose dependent rect. 9 14
625 14.62 humidity 50 43200 < th dose independent no NA NA
629 14.62 radiation 20 14400 < th dose independent rect. 1 5
637 14.62 radiation 20 4320 < th dose independent rect. 17 8
639 14.62 temperature 20 4320 < th dose independent rect. 5 10
655 14.62 temperature 20 4320 < th dose independent rect. 4 15
692 14.62 humidity 50 43200 > th dose independent rect. 11 23
693 14.62 humidity 50 43200 > th dose independent rect. 13 23
708 14.62 temperature 25 4320 < th dose dependent rect. 10 12
716 14.63 humidity 70 43200 > th dose independent sin 12 NA
719 14.63 humidity 80 43200 < th dose independent sin 7 NA
722 14.63 humidity 50 43200 > th dose independent rect. 13 1
723 14.63 humidity 50 43200 < th dose independent rect. 13 1
765 14.63 temperature 20 4320 > th dose independent rect. 4 15
774 14.63 humidity 50 43200 > th dose independent rect. 17 16
778 14.63 humidity 50 43200 < th dose independent rect. 17 16
786 14.63 humidity 50 43200 > th dose independent rect. 16 18
788 14.63 humidity 50 43200 < th dose independent rect. 16 18
821 14.63 humidity 80 43200 < th dose dependent rect. 22 16
824 14.63 humidity 50 43200 < th dose dependent rect. 17 17
830 14.64 temperature 20 4320 < th dose independent sin 1 NA
832 14.64 humidity 70 43200 > th dose independent sin 8 NA
838 14.64 wind 7 43200 < th dose independent rect. 1 1
848 14.64 temperature 20 4320 > th dose independent rect. 5 10
864 14.64 humidity 70 43200 < th dose independent rect. 17 13
900 14.64 humidity 50 43200 < th dose independent rect. 13 23
902 14.64 temperature 25 4320 < th dose dependent sin 19 NA
920 14.64 humidity 80 43200 < th dose dependent rect. 22 14
945 14.65 wind 7 43200 > th dose independent sin 9 NA
947 14.65 wind 5 43200 > th dose independent sin 5 NA
948 14.65 wind 7 43200 < th dose independent sin 9 NA
949 14.65 temperature 20 4320 > th dose independent sin 0 NA
971 14.65 humidity 70 43200 < th dose independent rect. 18 9