Os06g0165500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os06g0165500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 206.07 | 0.674 | 9.7 | 0.78 | 3.58 | -3.69 | -0.0464 | -3.85 | -1.02 | 8.27 | 0.934 | 1520 | 15.7 | -- |
| 206.61 | 0.669 | 9.76 | 0.636 | 3.59 | -2.73 | 0.277 | -- | -1.1 | 8.27 | 2.34 | 1535 | 15.8 | -- |
| 205.95 | 0.668 | 9.7 | 0.787 | 3.59 | -3.72 | -- | -4.04 | -1.02 | 8.28 | 0.8875 | 1512 | 15.7 | -- |
| 206.7 | 0.67 | 9.77 | 0.657 | 3.56 | -2.76 | -- | -- | -1.09 | 8.26 | 2.34 | 1535 | 15.5 | -- |
| 291.31 | 0.799 | 9.8 | 1.09 | -- | -3.71 | -- | -0.114 | -0.802 | -- | 49 | 3 | 10.4 | -- |
| 296.38 | 0.807 | 9.67 | 1.15 | 3.87 | -- | 0.133 | -- | -0.733 | 8.3 | -- | -- | -- | -- |
| 296.44 | 0.806 | 9.67 | 1.15 | 3.87 | -- | -- | -- | -0.733 | 8.3 | -- | -- | -- | -- |
| 277.2 | 0.775 | 9.8 | 1.14 | -- | -3.88 | -- | -- | -0.771 | -- | 90.16 | 4 | 10.2 | -- |
| 215.89 | 0.684 | 9.78 | -- | 3.61 | -2.97 | -- | -- | -1.19 | 8.25 | 2.038 | 1535 | 16.3 | -- |
| 1125.74 | 1.57 | 9.77 | 1.17 | -- | -- | -- | -- | -0.691 | -- | -- | -- | -- | -- |
| 331.27 | 0.851 | 9.7 | -- | 3.87 | -- | -- | -- | -0.861 | 8.28 | -- | -- | -- | -- |
| 310.72 | 0.821 | 9.82 | -- | -- | -3.87 | -- | -- | -0.899 | -- | 86.7 | 4 | 10.2 | -- |
| 1162.14 | 1.59 | 9.8 | -- | -- | -- | -- | -- | -0.822 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 213.06 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 6 |
| 2 | 213.07 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 9 | 8 |
| 7 | 216.95 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 9 | 217.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 13 |
| 12 | 217.21 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 18 | 217.66 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 52 | 218.54 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 19 |
| 53 | 218.83 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 54 | 218.91 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 10 |
| 58 | 218.96 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 13 |
| 65 | 219.12 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 82 | 219.41 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 112 | 220.10 | radiation | 1.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 141 | 220.74 | radiation | 1.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 217 | 222.41 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 13 | 2 |
| 239 | 223.15 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 5 | 12 |
| 241 | 223.18 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 312 | 224.18 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 19 | 22 |
| 313 | 224.23 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 13 | 2 |
| 320 | 224.32 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 15 |
| 341 | 224.59 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 18 |
| 375 | 225.50 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 377 | 225.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 464 | 227.50 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 2 | 19 |
| 485 | 227.64 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 23 | 22 |
| 506 | 227.73 | radiation | 1.0 | 1440 | < th | dose dependent | no | NA | NA |
| 551 | 228.21 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 19 |
| 563 | 228.25 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 2 | 22 |
| 575 | 228.34 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 23 | 22 |
| 591 | 228.40 | radiation | 1.0 | 1440 | < th | dose independent | no | NA | NA |
| 605 | 228.49 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 18 | 23 |
| 611 | 228.51 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 18 | 23 |
| 614 | 228.52 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 674 | 229.10 | radiation | 1.0 | 1440 | > th | dose independent | no | NA | NA |
| 843 | 234.09 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 11 |
| 849 | 234.60 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 850 | 234.67 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 10 |
| 927 | 237.41 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 4 |
| 956 | 238.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 983 | 239.51 | wind | 7.0 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 986 | 239.67 | wind | 7.0 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 994 | 239.85 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 1000 | 240.04 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 9 | 1 |