Os06g0165200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os06g0165200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 366.11 | 0.899 | 4.51 | 0.424 | 2.14 | -0.589 | 1.33 | -2.85 | -1.06 | 8.09 | 20.1 | 604 | -- | -- |
| 383.66 | 0.912 | 4.43 | 0.85 | 2.11 | -0.305 | 2.15 | -- | -0.939 | 8.29 | 22.6 | 478 | -- | -- |
| 370.89 | 0.897 | 4.52 | 0.381 | 2.13 | -0.646 | -- | -3.19 | -1.07 | 8.04 | 20.2 | 603 | -- | -- |
| 397.03 | 0.934 | 4.42 | 0.946 | 2.28 | -0.35 | -- | -- | -0.912 | 8.26 | 22.06 | 487 | -- | -- |
| 567.65 | 1.11 | 4.44 | 0.687 | -- | -1.35 | -- | -2.31 | -0.618 | -- | 25.2 | 620 | -- | -- |
| 388.4 | 0.924 | 4.45 | 0.788 | 2.22 | -- | 2.28 | -- | -1.01 | 8.11 | -- | -- | -- | -- |
| 404.01 | 0.941 | 4.45 | 0.852 | 2.22 | -- | -- | -- | -1.01 | 8.07 | -- | -- | -- | -- |
| 564.24 | 1.11 | 4.38 | 1.3 | -- | -1.47 | -- | -- | -0.427 | -- | 25.21 | 576 | -- | -- |
| 419.84 | 0.96 | 4.45 | -- | 2.27 | -0.237 | -- | -- | -1.05 | 8.17 | 22.06 | 487 | -- | -- |
| 674.87 | 1.21 | 4.5 | 0.872 | -- | -- | -- | -- | -0.985 | -- | -- | -- | -- | -- |
| 423.15 | 0.962 | 4.47 | -- | 2.23 | -- | -- | -- | -1.11 | 8.04 | -- | -- | -- | -- |
| 606.95 | 1.15 | 4.42 | -- | -- | -1.28 | -- | -- | -0.636 | -- | 25.29 | 574 | -- | -- |
| 694.95 | 1.23 | 4.53 | -- | -- | -- | -- | -- | -1.08 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 352.62 | wind | 3.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 2 | 353.32 | wind | 3.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 3 | 353.55 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 5 | 355.36 | wind | 1.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 7 | 355.89 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 8 | 355.97 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 10 | 356.26 | wind | 9.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 14 | 356.39 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 20 | 356.56 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 21 | 356.56 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 29 | 356.80 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 6 |
| 31 | 356.84 | wind | 5.0 | 10 | < th | dose dependent | rect. | 17 | 10 |
| 37 | 356.97 | wind | 7.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 52 | 357.34 | humidity | 80.0 | 720 | > th | dose independent | rect. | 21 | 5 |
| 79 | 357.84 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 94 | 358.05 | wind | 5.0 | 10 | < th | dose dependent | rect. | 21 | 6 |
| 115 | 358.33 | wind | 3.0 | 90 | < th | dose independent | rect. | 16 | 11 |
| 125 | 358.50 | wind | 7.0 | 10 | < th | dose dependent | rect. | 14 | 13 |
| 126 | 358.53 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 162 | 359.04 | humidity | 80.0 | 1440 | > th | dose dependent | sin | 6 | NA |
| 172 | 359.17 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 10 |
| 178 | 359.21 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 179 | 359.22 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 5 |
| 182 | 359.24 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 184 | 359.30 | wind | 3.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 203 | 359.42 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 2 |
| 210 | 359.46 | wind | 3.0 | 1440 | < th | dose independent | rect. | 7 | 6 |
| 211 | 359.46 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 214 | 359.49 | wind | 3.0 | 10 | < th | dose independent | rect. | 21 | 6 |
| 242 | 359.71 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 259 | 359.82 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 267 | 359.89 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 7 |
| 270 | 359.90 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 279 | 359.99 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 1 | 3 |
| 284 | 360.01 | wind | 3.0 | 10 | < th | dose independent | rect. | 17 | 10 |
| 291 | 360.07 | wind | 3.0 | 90 | < th | dose independent | rect. | 19 | 8 |
| 298 | 360.11 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 302 | 360.13 | humidity | 80.0 | 1440 | < th | dose independent | sin | 7 | NA |
| 332 | 360.30 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 4 |
| 344 | 360.40 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 6 |
| 349 | 360.42 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 355 | 360.47 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 369 | 360.57 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 373 | 360.60 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 3 | 11 |
| 380 | 360.65 | humidity | 80.0 | 1440 | > th | dose independent | sin | 7 | NA |
| 415 | 360.83 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 417 | 360.83 | wind | 5.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 481 | 361.11 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 506 | 361.23 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 2 | 5 |
| 512 | 361.26 | wind | 9.0 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 524 | 361.32 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 593 | 361.68 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 3 |
| 602 | 361.71 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 618 | 361.78 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 4 | 10 |
| 620 | 361.78 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 638 | 361.86 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 662 | 361.92 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 1 |
| 710 | 362.06 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 721 | 362.08 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 737 | 362.15 | wind | 3.0 | 270 | < th | dose independent | rect. | 21 | 3 |
| 797 | 362.33 | humidity | 80.0 | 90 | > th | dose independent | rect. | 6 | 21 |
| 804 | 362.36 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 10 | NA |
| 849 | 362.54 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 851 | 362.55 | temperature | 25.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 873 | 362.61 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 3 |
| 887 | 362.64 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 900 | 362.68 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 6 |
| 907 | 362.70 | wind | 3.0 | 30 | < th | dose independent | rect. | 23 | 4 |
| 949 | 362.81 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 965 | 362.85 | wind | 3.0 | 1440 | > th | dose independent | rect. | 21 | 18 |
| 990 | 362.92 | wind | 7.0 | 4320 | < th | dose independent | rect. | 20 | 7 |