Os06g0164900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Curculin-like (mannose-binding) lectin domain containing protein.
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Os06g0164900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Curculin-like (mannose-binding) lectin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 267.25 | 0.761 | -7050 | 43100 | 0.89 | -2060000 | -0.896 | 12600000 | 0.162 | 5.17 | 995 | 10 | -- | -- |
| 258.25 | 0.754 | 3.85 | -0.113 | 0.88 | 6.13 | -0.937 | -- | 0.16 | 5.13 | 994.8 | 10 | -- | -- |
| 269.22 | 0.764 | -7050 | 43100 | 0.889 | -2060000 | -- | 12600000 | 0.167 | 5.26 | 995 | 10 | -- | -- |
| 260.41 | 0.752 | 3.84 | -0.114 | 0.877 | 6.2 | -- | -- | 0.165 | 5.23 | 994.8 | 10 | -- | -- |
| 310.14 | 0.82 | -7050 | 43100 | -- | -2060000 | -- | 12600000 | 0.187 | -- | 995 | 10 | -- | -- |
| 295.4 | 0.806 | 3.85 | -0.0789 | 0.824 | -- | -1.12 | -- | 0.147 | 5.14 | -- | -- | -- | -- |
| 298.53 | 0.809 | 3.85 | -0.0778 | 0.818 | -- | -- | -- | 0.152 | 5.28 | -- | -- | -- | -- |
| 300.37 | 0.811 | 3.85 | -0.0798 | -- | 5.77 | -- | -- | 0.185 | -- | 994.8 | 10 | -- | -- |
| 260.75 | 0.752 | 3.84 | -- | 0.875 | 6.18 | -- | -- | 0.177 | 5.23 | 994.8 | 10 | -- | -- |
| 333.49 | 0.853 | 3.86 | -0.0495 | -- | -- | -- | -- | 0.173 | -- | -- | -- | -- | -- |
| 298.69 | 0.808 | 3.85 | -- | 0.817 | -- | -- | -- | 0.161 | 5.28 | -- | -- | -- | -- |
| 300.54 | 0.81 | 3.85 | -- | -- | 5.75 | -- | -- | 0.194 | -- | 994.8 | 10 | -- | -- |
| 333.56 | 0.852 | 3.86 | -- | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 257.82 | atmosphere | 995.0 | 30 | > th | dose independent | sin | 6 | NA |
| 6 | 258.31 | atmosphere | 995.0 | 10 | < th | dose independent | sin | 6 | NA |
| 8 | 258.31 | atmosphere | 995.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 9 | 258.31 | atmosphere | 995.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 135 | 258.31 | atmosphere | 995.0 | 30 | < th | dose dependent | sin | 6 | NA |
| 136 | 258.31 | atmosphere | 995.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 137 | 258.31 | atmosphere | 995.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 276 | 258.66 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 21 | 3 |
| 314 | 261.89 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 444 | 265.27 | wind | 1.0 | 270 | < th | dose dependent | rect. | 24 | 1 |
| 472 | 266.64 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 19 | 6 |
| 506 | 267.64 | atmosphere | 995.0 | 10 | < th | dose dependent | no | NA | NA |
| 721 | 267.79 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 23 | 2 |
| 723 | 267.88 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 1 | 1 |
| 726 | 268.03 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 731 | 268.26 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 734 | 268.38 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 735 | 268.38 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 753 | 268.91 | temperature | 30.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 755 | 269.07 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 20 | 1 |
| 758 | 269.14 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 23 | 5 |
| 796 | 270.47 | wind | 1.0 | 90 | < th | dose independent | rect. | 24 | 1 |
| 816 | 271.13 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 817 | 271.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 851 | 271.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 873 | 272.54 | wind | 1.0 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 887 | 273.01 | temperature | 20.0 | 10 | > th | dose independent | rect. | 20 | 11 |
| 889 | 273.06 | wind | 7.0 | 270 | > th | dose dependent | rect. | 23 | 4 |
| 898 | 273.28 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 2 |
| 899 | 273.33 | wind | 1.0 | 270 | < th | dose independent | rect. | 3 | 1 |
| 907 | 273.65 | wind | 9.0 | 720 | > th | dose independent | rect. | 19 | 1 |
| 909 | 273.65 | wind | 9.0 | 720 | > th | dose dependent | rect. | 19 | 1 |
| 913 | 273.81 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 23 |
| 914 | 273.82 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 916 | 273.83 | atmosphere | 1005.0 | 10 | < th | dose independent | rect. | 23 | 7 |
| 923 | 273.91 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 21 | 11 |
| 924 | 273.93 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 23 | 23 |
| 926 | 273.96 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 931 | 274.05 | radiation | 20.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 962 | 274.20 | wind | 5.0 | 90 | > th | dose dependent | rect. | 23 | 7 |
| 969 | 274.29 | wind | 7.0 | 270 | > th | dose independent | rect. | 23 | 4 |
| 979 | 274.41 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 11 | 4 |
| 990 | 274.54 | wind | 7.0 | 270 | > th | dose independent | rect. | 22 | 6 |