Os06g0163200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Esterase/lipase/thioesterase domain containing protein.
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Os06g0163200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Esterase/lipase/thioesterase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 44.25 | 0.313 | 12.6 | -1.71 | 1.02 | 0.612 | 0.299 | -0.35 | -0.638 | 7.82 | 24.9 | 1307 | -- | -- |
| 44.32 | 0.31 | 12.6 | -1.63 | 1.01 | 0.579 | 0.295 | -- | -0.622 | 7.85 | 24.85 | 1307 | -- | -- |
| 44.51 | 0.311 | 12.6 | -1.71 | 1.02 | 0.614 | -- | -0.367 | -0.639 | 7.85 | 24.9 | 1307 | -- | -- |
| 44.57 | 0.311 | 12.6 | -1.61 | 1.02 | 0.572 | -- | -- | -0.616 | 7.84 | 24.89 | 1309 | -- | -- |
| 99.84 | 0.465 | 12.6 | -1.65 | -- | 0.592 | -- | -0.132 | -0.628 | -- | 24.4 | 1377 | -- | -- |
| 56.65 | 0.353 | 12.5 | -1.43 | 1.02 | -- | 0.373 | -- | -0.543 | 7.47 | -- | -- | -- | -- |
| 57.03 | 0.354 | 12.5 | -1.42 | 1.02 | -- | -- | -- | -0.544 | 7.51 | -- | -- | -- | -- |
| 99.84 | 0.465 | 12.6 | -1.61 | -- | 0.576 | -- | -- | -0.617 | -- | 24.37 | 1374 | -- | -- |
| 108.41 | 0.485 | 12.5 | -- | 1.01 | 0.206 | -- | -- | -0.355 | 7.7 | 28.9 | 2743 | -- | -- |
| 112.88 | 0.496 | 12.6 | -1.41 | -- | -- | -- | -- | -0.528 | -- | -- | -- | -- | -- |
| 110.28 | 0.491 | 12.5 | -- | 1.01 | -- | -- | -- | -0.386 | 7.61 | -- | -- | -- | -- |
| 162.51 | 0.594 | 12.5 | -- | -- | 0.237 | -- | -- | -0.34 | -- | 28.76 | 5607 | -- | -- |
| 165.03 | 0.6 | 12.5 | -- | -- | -- | -- | -- | -0.372 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.76 | temperature | 25 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 55 | 40.63 | humidity | 90 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 68 | 41.08 | temperature | 15 | 270 | > th | dose dependent | sin | 9 | NA |
| 70 | 41.14 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 5 |
| 76 | 41.32 | temperature | 15 | 90 | > th | dose dependent | sin | 7 | NA |
| 99 | 41.59 | temperature | 25 | 720 | > th | dose independent | rect. | 18 | 6 |
| 100 | 41.60 | temperature | 20 | 720 | > th | dose dependent | sin | 13 | NA |
| 109 | 41.67 | temperature | 25 | 720 | < th | dose independent | rect. | 18 | 7 |
| 114 | 41.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 8 |
| 145 | 42.03 | temperature | 25 | 720 | < th | dose independent | rect. | 20 | 1 |
| 165 | 42.17 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 10 |
| 193 | 42.36 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 230 | 42.61 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 11 |
| 232 | 42.62 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 13 |
| 247 | 42.65 | radiation | 1 | 1440 | < th | dose dependent | rect. | 9 | 18 |
| 249 | 42.66 | temperature | 30 | 30 | < th | dose dependent | sin | 7 | NA |
| 310 | 42.82 | temperature | 25 | 720 | > th | dose independent | rect. | 20 | 1 |
| 317 | 42.87 | radiation | 1 | 1440 | < th | dose dependent | sin | 21 | NA |
| 337 | 42.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 338 | 42.95 | radiation | 10 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 360 | 43.01 | radiation | 10 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 426 | 43.28 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 4 |
| 428 | 43.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 430 | 43.29 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 11 |
| 439 | 43.30 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 18 |
| 442 | 43.30 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 6 |
| 445 | 43.31 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 16 |
| 474 | 43.35 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 507 | 43.39 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 18 |
| 514 | 43.41 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 8 |
| 551 | 43.46 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 15 |
| 568 | 43.47 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 656 | 43.61 | radiation | 1 | 1440 | < th | dose independent | sin | 19 | NA |
| 721 | 43.73 | radiation | 1 | 1440 | > th | dose independent | sin | 19 | NA |
| 724 | 43.73 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 740 | 43.75 | temperature | 30 | 720 | < th | dose dependent | sin | 13 | NA |
| 861 | 44.07 | humidity | 90 | 720 | > th | dose independent | rect. | 21 | 2 |
| 875 | 44.10 | humidity | 90 | 720 | > th | dose dependent | rect. | 8 | 16 |
| 876 | 44.11 | temperature | 25 | 720 | > th | dose independent | sin | 13 | NA |