Os06g0159900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Arm repeat containing protein.
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Os06g0159900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Arm repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 148.06 | 0.572 | 9.35 | 1.64 | 1.97 | -2.07 | 0.224 | -0.284 | 0.541 | 8.96 | 30.85 | 9 | -- | -- |
| 148.15 | 0.567 | 9.36 | 1.59 | 1.97 | -2.08 | 0.273 | -- | 0.532 | 8.96 | 30.97 | 8 | -- | -- |
| 148.22 | 0.567 | 9.35 | 1.66 | 1.97 | -2.08 | -- | -0.397 | 0.544 | 8.94 | 30.82 | 8 | -- | -- |
| 148.35 | 0.567 | 9.36 | 1.6 | 1.97 | -2.09 | -- | -- | 0.532 | 8.95 | 31 | 7 | -- | -- |
| 359.9 | 0.888 | 9.43 | 1.57 | -- | -2.58 | -- | -0.604 | 0.418 | -- | 28.59 | 5 | -- | -- |
| 202.95 | 0.668 | 9.27 | 2.06 | 2.2 | -- | 0.476 | -- | 0.902 | 10.2 | -- | -- | -- | -- |
| 203.84 | 0.669 | 9.27 | 2.08 | 2.2 | -- | -- | -- | 0.903 | 10.1 | -- | -- | -- | -- |
| 360.3 | 0.884 | 9.45 | 1.46 | -- | -2.58 | -- | -- | 0.388 | -- | 28.7 | 5 | -- | -- |
| 210.02 | 0.679 | 9.42 | -- | 1.94 | -2.75 | -- | -- | 0.254 | 8.47 | 31 | 7 | -- | -- |
| 496.96 | 1.04 | 9.33 | 2.05 | -- | -- | -- | -- | 0.9 | -- | -- | -- | -- | -- |
| 317.44 | 0.833 | 9.32 | -- | 2.19 | -- | -- | -- | 0.672 | 10.1 | -- | -- | -- | -- |
| 412.12 | 0.945 | 9.5 | -- | -- | -2.99 | -- | -- | 0.156 | -- | 28.64 | 2 | -- | -- |
| 607.36 | 1.15 | 9.38 | -- | -- | -- | -- | -- | 0.673 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.54 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 3 | 133.83 | temperature | 15 | 10 | > th | dose dependent | sin | 6 | NA |
| 7 | 134.21 | temperature | 30 | 10 | < th | dose dependent | sin | 5 | NA |
| 66 | 142.51 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 68 | 142.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 72 | 142.93 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 19 |
| 111 | 145.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 22 |
| 133 | 146.94 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 16 |
| 145 | 147.30 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 160 | 147.84 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 167 | 148.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 17 |
| 175 | 148.34 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 176 | 148.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 15 |
| 193 | 149.10 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 197 | 149.16 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 207 | 149.50 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 208 | 149.53 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 216 | 149.73 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 219 | 149.84 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 15 |
| 221 | 149.91 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 16 |
| 226 | 150.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 18 |
| 233 | 150.22 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 237 | 150.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 15 |
| 268 | 151.21 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 310 | 152.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 320 | 152.32 | temperature | 20 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 391 | 154.28 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 7 |
| 394 | 154.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 413 | 154.86 | temperature | 20 | 90 | > th | dose independent | rect. | 5 | 21 |
| 438 | 155.46 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 446 | 155.53 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 21 |
| 463 | 155.83 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 12 |
| 477 | 156.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 527 | 156.74 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 528 | 156.80 | temperature | 25 | 10 | > th | dose independent | rect. | 5 | 6 |
| 558 | 157.24 | temperature | 20 | 10 | > th | dose independent | rect. | 6 | 20 |
| 564 | 157.36 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 15 |
| 586 | 157.63 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 15 |
| 598 | 157.80 | temperature | 20 | 30 | > th | dose dependent | rect. | 19 | 23 |
| 673 | 158.62 | temperature | 25 | 10 | < th | dose independent | sin | 5 | NA |
| 727 | 159.21 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 6 |
| 829 | 160.31 | temperature | 20 | 10 | > th | dose dependent | rect. | 5 | 9 |
| 879 | 160.80 | temperature | 25 | 10 | < th | dose independent | rect. | 2 | 13 |
| 886 | 160.87 | temperature | 25 | 30 | > th | dose independent | sin | 5 | NA |
| 888 | 160.87 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 3 |
| 946 | 161.42 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |