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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0158800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF1191 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.04 (0.0363) R2 : 0.0171
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.215 (0.0764) R2dN8 : 0.0221 R2N8 : 0.0171
σ : 0.683
deviance : 214.26
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
208.06 0.678 2.98 0.398 0.201 -0.74 -0.331 3.19 0.328 17.5 25.7 586 -- --
210.12 0.675 3.03 0.0169 0.0309 -0.381 -0.177 -- 0.267 17.5 22.4 784 -- --
208.27 0.672 2.99 0.345 0.197 -0.708 -- 2.75 0.316 17.4 25.7 588 -- --
209.71 0.674 3.02 -0.0133 0.145 -0.442 -- -- 0.271 16.7 22.05 525 -- --
209.42 0.674 2.99 0.343 -- -0.549 -- 2.45 0.293 -- 25.7 753 -- --
213.44 0.685 3.04 -0.117 0.0868 -- 0.0617 -- 0.202 9.96 -- -- -- --
213.46 0.684 3.04 -0.115 0.0863 -- -- -- 0.202 10.1 -- -- -- --
210.13 0.675 3.02 -0.0161 -- -0.371 -- -- 0.266 -- 21.4 773 -- --
209.71 0.674 3.02 -- 0.142 -0.446 -- -- 0.275 16.8 22.21 526 -- --
213.91 0.683 3.04 -0.116 -- -- -- -- 0.202 -- -- -- -- --
213.8 0.684 3.03 -- 0.0868 -- -- -- 0.215 10.2 -- -- -- --
210.13 0.675 3.02 -- -- -0.376 -- -- 0.27 -- 21.4 773 -- --
214.26 0.683 3.04 -- -- -- -- -- 0.215 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 197.04 wind 5.0 90 > th dose independent rect. 12 1
2 197.85 wind 3.0 90 > th dose dependent rect. 12 1
5 200.05 atmosphere 1005.0 90 > th dose independent rect. 12 1
6 200.40 wind 9.0 30 < th dose independent rect. 13 23
7 200.59 radiation 20.0 30 > th dose independent rect. 12 1
8 200.65 temperature 20.0 10 < th dose dependent rect. 8 9
9 200.67 humidity 60.0 30 > th dose independent rect. 12 1
10 200.78 temperature 30.0 30 < th dose independent rect. 12 1
11 200.79 atmosphere 1010.0 30 < th dose independent rect. 12 1
12 200.82 temperature 10.0 1440 > th dose independent rect. 13 1
17 200.82 atmosphere 995.0 1440 > th dose independent rect. 13 1
20 200.82 temperature 10.0 1440 > th dose independent rect. 14 23
23 200.84 radiation 1.0 30 > th dose dependent rect. 12 1
25 200.86 temperature 25.0 30 > th dose independent rect. 12 1
26 200.86 humidity 50.0 30 > th dose dependent rect. 12 1
29 200.93 wind 9.0 30 < th dose independent rect. 12 1
30 200.93 temperature 10.0 30 > th dose independent rect. 12 1
35 200.93 precipitation 0.1 30 < th dose independent rect. 12 1
36 200.93 temperature 10.0 30 > th dose independent rect. 13 23
38 200.93 precipitation 0.1 30 < th dose dependent rect. 12 1
41 200.95 wind 9.0 30 < th dose dependent rect. 12 1
42 200.97 atmosphere 995.0 30 > th dose dependent rect. 12 1
43 200.98 humidity 80.0 30 < th dose independent rect. 12 1
44 200.98 radiation 40.0 30 > th dose independent rect. 12 1
50 201.05 temperature 10.0 30 > th dose dependent rect. 12 1
62 201.18 atmosphere 1015.0 30 < th dose dependent rect. 12 1
66 201.32 humidity 90.0 30 < th dose dependent rect. 12 1
69 201.45 radiation 1.0 90 < th dose independent rect. 14 1
71 201.45 radiation 1.0 90 < th dose dependent rect. 14 1
76 201.60 temperature 25.0 90 < th dose dependent rect. 14 1
78 201.64 wind 1.0 30 > th dose independent rect. 16 12
98 202.01 temperature 20.0 90 < th dose dependent rect. 12 4
104 202.06 temperature 20.0 10 < th dose dependent rect. 12 5
109 202.16 temperature 20.0 90 < th dose independent rect. 14 2
173 202.52 temperature 10.0 30 > th dose dependent rect. 13 23
181 202.65 temperature 25.0 90 > th dose independent rect. 4 1
183 202.67 temperature 25.0 10 > th dose independent rect. 4 1
185 202.70 temperature 25.0 90 > th dose dependent rect. 4 1
186 202.70 radiation 1.0 90 < th dose dependent rect. 11 5
223 203.30 atmosphere 1000.0 10 > th dose dependent rect. 12 4
228 203.35 wind 3.0 90 > th dose independent rect. 11 5
229 203.36 humidity 50.0 30 > th dose dependent rect. 12 4
250 203.38 radiation 30.0 14400 < th dose independent rect. 17 12
266 203.40 wind 1.0 30 < th dose independent rect. 17 7
268 203.42 wind 1.0 30 < th dose independent rect. 23 1
269 203.42 wind 1.0 720 > th dose independent rect. 16 9
272 203.43 wind 1.0 30 < th dose independent rect. 21 3
278 203.48 humidity 90.0 10 < th dose independent rect. 4 1
285 203.51 atmosphere 1005.0 10 > th dose independent rect. 12 4
292 203.56 temperature 20.0 90 < th dose independent rect. 12 4
305 203.73 radiation 1.0 1440 > th dose independent rect. 11 1
317 203.83 wind 3.0 10 > th dose independent rect. 12 4
318 203.84 humidity 70.0 90 > th dose independent rect. 14 1
320 203.87 precipitation 0.1 30 < th dose independent rect. 13 23
321 203.87 precipitation 0.1 30 < th dose dependent rect. 13 23
328 203.99 radiation 30.0 14400 < th dose independent rect. 17 4
329 203.99 radiation 1.0 10 < th dose dependent rect. 4 13
380 204.14 wind 7.0 720 < th dose independent rect. 16 1
382 204.15 humidity 80.0 10 > th dose independent rect. 14 2
407 204.33 atmosphere 1015.0 30 < th dose independent rect. 13 23
409 204.35 humidity 70.0 10 > th dose dependent rect. 14 2
418 204.40 radiation 30.0 14400 < th dose independent rect. 17 10
433 204.52 precipitation 0.1 720 < th dose independent rect. 1 15
434 204.52 wind 1.0 30 > th dose dependent rect. 4 1
435 204.52 precipitation 0.1 720 < th dose dependent rect. 1 15
436 204.54 humidity 80.0 90 > th dose independent rect. 12 4
437 204.54 humidity 70.0 270 > th dose independent rect. 12 17
438 204.55 radiation 20.0 270 > th dose independent rect. 14 19
440 204.59 humidity 80.0 10 > th dose dependent rect. 16 1
469 204.64 radiation 30.0 14400 < th dose independent rect. 17 7
483 204.74 radiation 1.0 1440 < th dose independent rect. 11 1
485 204.74 radiation 1.0 1440 < th dose dependent rect. 11 1
506 204.77 precipitation 0.1 720 < th dose independent rect. 4 9
507 204.77 precipitation 0.1 720 < th dose dependent rect. 4 9
530 204.79 radiation 1.0 10 < th dose independent rect. 11 5
578 205.03 radiation 1.0 90 < th dose independent rect. 19 22
580 205.05 radiation 1.0 1440 > th dose independent rect. 8 5
585 205.07 humidity 90.0 14400 < th dose dependent rect. 6 1
588 205.08 radiation 1.0 1440 < th dose independent rect. 8 4
589 205.08 temperature 30.0 270 < th dose dependent rect. 12 1
590 205.08 radiation 1.0 1440 < th dose dependent rect. 8 4
605 205.19 wind 9.0 720 < th dose dependent rect. 4 1
618 205.25 humidity 60.0 10 > th dose independent rect. 12 4
624 205.27 wind 7.0 10 < th dose independent rect. 16 12
626 205.28 humidity 50.0 720 > th dose independent rect. 4 9
630 205.30 atmosphere 995.0 30 > th dose independent rect. 13 23
640 205.32 radiation 1.0 30 < th dose independent rect. 4 13
646 205.33 radiation 1.0 270 > th dose dependent rect. 14 19
647 205.33 radiation 20.0 10 < th dose dependent rect. 20 20
649 205.34 wind 1.0 720 > th dose independent rect. 23 2
654 205.36 humidity 60.0 14400 > th dose dependent rect. 6 1
664 205.38 atmosphere 995.0 720 > th dose independent rect. 1 15
669 205.39 temperature 10.0 720 > th dose independent rect. 16 9
670 205.39 radiation 40.0 720 < th dose independent rect. 16 9
671 205.39 temperature 10.0 720 > th dose independent rect. 1 15
673 205.40 radiation 40.0 14400 < th dose dependent rect. 18 3
674 205.42 wind 7.0 90 < th dose independent rect. 16 11
676 205.42 radiation 40.0 14400 < th dose dependent rect. 18 6
683 205.46 radiation 40.0 14400 < th dose dependent rect. 18 11
692 205.50 temperature 25.0 720 < th dose independent rect. 24 1
697 205.51 radiation 40.0 14400 < th dose dependent rect. 18 9
698 205.52 temperature 10.0 720 > th dose independent rect. 4 9
699 205.52 atmosphere 995.0 720 > th dose independent rect. 4 9
700 205.52 atmosphere 1015.0 720 < th dose independent rect. 4 9
701 205.52 temperature 10.0 720 > th dose independent rect. 13 15
710 205.54 radiation 30.0 14400 < th dose dependent rect. 23 6
713 205.55 radiation 1.0 30 < th dose independent rect. 13 4
721 205.57 wind 9.0 720 < th dose independent rect. 16 9
726 205.59 humidity 80.0 720 > th dose independent rect. 4 1
740 205.62 radiation 40.0 30 > th dose dependent sin 14 NA
742 205.63 temperature 25.0 30 > th dose independent rect. 13 23
743 205.63 temperature 25.0 720 > th dose dependent rect. 13 2
750 205.65 wind 7.0 720 < th dose independent rect. 4 1
751 205.65 wind 1.0 30 > th dose independent rect. 4 12
759 205.67 radiation 40.0 43200 < th dose dependent rect. 2 3
767 205.70 temperature 30.0 30 < th dose dependent rect. 12 1
801 205.77 radiation 1.0 90 < th dose dependent rect. 19 22
807 205.79 wind 1.0 30 > th dose independent rect. 4 1
853 205.91 radiation 40.0 43200 < th dose dependent rect. 4 1
867 205.94 radiation 40.0 30 > th dose independent sin 14 NA
871 205.94 radiation 1.0 14400 < th dose dependent rect. 9 1
877 205.95 precipitation 0.1 720 < th dose independent rect. 4 1
881 205.95 precipitation 0.1 720 < th dose dependent rect. 4 1
886 205.96 atmosphere 1000.0 30 > th dose independent rect. 4 12
889 205.96 humidity 80.0 43200 > th dose dependent rect. 22 2
910 206.00 precipitation 0.1 720 < th dose independent rect. 16 9
914 206.00 precipitation 0.1 720 < th dose dependent rect. 16 9
917 206.01 wind 3.0 90 > th dose independent rect. 11 12
920 206.02 radiation 10.0 43200 < th dose independent rect. 19 10
921 206.02 wind 7.0 90 < th dose independent rect. 16 19
925 206.02 atmosphere 1005.0 30 > th dose dependent rect. 12 10
929 206.04 radiation 10.0 43200 < th dose independent rect. 2 3
931 206.04 radiation 10.0 43200 < th dose independent rect. 23 6
946 206.06 atmosphere 995.0 720 > th dose independent rect. 5 23
957 206.08 radiation 10.0 43200 < th dose independent rect. 4 1
960 206.08 wind 1.0 30 > th dose independent rect. 13 23
967 206.09 atmosphere 1000.0 720 > th dose independent rect. 4 1
972 206.10 radiation 1.0 14400 > th dose independent rect. 8 5
976 206.10 wind 1.0 30 > th dose independent rect. 16 20
988 206.12 radiation 1.0 43200 > th dose independent rect. 4 1