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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0158200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.34 (0.0255) R2 : 0.193
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.692 (0.0663) R2dC : 0.193 R2C : 0.193
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.014 (0.0537) R2dN8 : 0.000155 R2N8 : -0.000589
σ : 0.481
deviance : 105.63
__
_____
C
peak time of C : 4.97
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
98.85 0.467 8.24 0.946 0.78 -0.696 -0.144 9.98 0.0598 5.22 29.49 626 -- --
101.45 0.469 8.31 0.144 0.766 0.391 -0.264 -- 0.0226 5.38 29.4 657 -- --
98.87 0.463 8.24 0.97 0.776 -0.718 -- 10.2 0.0663 5.18 29.39 610 -- --
101.24 0.469 8.33 0.146 0.796 0.407 -- -- 0.0403 5.24 30 635 -- --
120 0.51 8.23 1.29 -- -1.32 -- 10.9 0.161 -- 27.81 565 -- --
104.09 0.478 8.34 0.2 0.692 -- -0.467 -- 0.00622 5.15 -- -- -- --
104.59 0.479 8.34 0.199 0.689 -- -- -- 0.00821 4.98 -- -- -- --
123.99 0.519 8.35 0.246 -- -0.511 -- -- 0.0765 -- 24.4 252 -- --
101.82 0.47 8.33 -- 0.8 0.428 -- -- 0.0267 5.24 29.99 638 -- --
129.53 0.532 8.34 0.224 -- -- -- -- 0.0259 -- -- -- -- --
105.63 0.481 8.34 -- 0.692 -- -- -- -0.014 4.97 -- -- -- --
125.86 0.523 8.34 -- -- -0.412 -- -- 0.0356 -- 24.2 242 -- --
130.85 0.534 8.35 -- -- -- -- -- 0.000993 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 92.11 temperature 25 10 > th dose dependent rect. 18 14
3 94.14 humidity 50 14400 < th dose dependent rect. 16 18
8 94.42 humidity 50 14400 < th dose dependent rect. 16 2
24 94.53 humidity 60 14400 < th dose dependent rect. 13 1
25 94.54 humidity 50 14400 < th dose independent rect. 16 18
27 94.64 humidity 50 14400 > th dose independent rect. 16 2
28 94.64 humidity 80 14400 < th dose dependent rect. 18 15
29 94.65 humidity 70 14400 > th dose independent rect. 8 3
34 94.72 radiation 30 14400 < th dose independent rect. 17 7
43 94.76 humidity 50 14400 > th dose independent rect. 16 8
45 94.76 humidity 70 14400 > th dose independent rect. 23 12
46 94.76 humidity 70 14400 > th dose independent rect. 20 15
47 94.76 humidity 50 14400 > th dose independent rect. 16 16
48 94.77 humidity 60 14400 > th dose independent rect. 12 1
54 94.77 humidity 80 14400 < th dose dependent sin 9 NA
57 94.79 humidity 70 14400 < th dose independent rect. 8 3
60 94.79 humidity 50 14400 > th dose independent rect. 16 13
63 94.80 humidity 50 14400 < th dose independent rect. 16 2
77 94.80 humidity 80 14400 < th dose independent rect. 22 12
86 94.85 humidity 60 14400 < th dose independent rect. 12 1
88 94.86 humidity 50 14400 > th dose independent rect. 16 18
90 94.87 humidity 80 14400 < th dose dependent rect. 22 13
92 94.89 temperature 25 30 > th dose dependent rect. 21 11
97 94.90 humidity 80 14400 < th dose dependent rect. 20 15
102 94.93 humidity 80 14400 < th dose dependent rect. 20 17
117 94.98 humidity 70 14400 < th dose independent rect. 20 15
122 94.99 humidity 70 14400 < th dose dependent rect. 8 6
126 95.00 humidity 80 14400 < th dose dependent rect. 8 2
211 95.16 humidity 70 14400 > th dose independent sin 8 NA
241 95.18 atmosphere 1000 10 > th dose independent rect. 5 14
256 95.21 humidity 70 14400 < th dose independent sin 8 NA
313 95.27 radiation 10 30 < th dose independent rect. 6 13
374 95.37 temperature 25 4320 > th dose dependent rect. 5 1
433 95.43 humidity 60 14400 < th dose dependent rect. 18 14
436 95.44 radiation 30 14400 < th dose independent rect. 17 3
455 95.47 radiation 40 14400 > th dose dependent rect. 12 1
475 95.49 temperature 25 90 > th dose independent rect. 17 15
506 95.53 humidity 60 14400 < th dose independent rect. 18 1
512 95.53 radiation 1 10 < th dose dependent rect. 19 22
515 95.54 radiation 40 14400 > th dose dependent rect. 10 1
516 95.54 radiation 10 10 < th dose dependent rect. 19 12
518 95.55 radiation 40 14400 > th dose independent rect. 10 1
534 95.58 humidity 50 14400 > th dose independent rect. 13 5
562 95.61 humidity 60 14400 < th dose independent rect. 18 13
573 95.62 humidity 60 14400 < th dose independent rect. 18 4
619 95.64 radiation 40 14400 > th dose dependent rect. 10 3
663 95.69 humidity 50 14400 > th dose independent rect. 13 11
666 95.69 humidity 50 14400 > th dose independent rect. 13 18
677 95.70 humidity 90 14400 < th dose independent rect. 1 3
711 95.71 humidity 90 14400 > th dose independent rect. 1 3
752 95.75 humidity 50 14400 > th dose independent sin 15 NA
893 95.84 humidity 50 14400 < th dose independent rect. 13 5
931 95.86 humidity 50 14400 < th dose independent sin 14 NA