Os06g0156900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glycosyl transferase, family 31 protein.
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Os06g0156900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glycosyl transferase, family 31 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.91 | 0.311 | 8.59 | 0.288 | 0.763 | 0.54 | -0.809 | -0.154 | 0.16 | 3.28 | 19.4 | 1696 | -- | -- |
| 43.88 | 0.309 | 8.59 | 0.302 | 0.756 | 0.603 | -0.808 | -- | 0.16 | 3.27 | 19.2 | 1661 | -- | -- |
| 45.88 | 0.315 | 8.6 | 0.298 | 0.76 | 0.567 | -- | -0.159 | 0.162 | 3.17 | 19.16 | 1626 | -- | -- |
| 45.92 | 0.316 | 8.59 | 0.322 | 0.755 | 0.595 | -- | -- | 0.171 | 3.19 | 19.17 | 1618 | -- | -- |
| 76.2 | 0.407 | 8.58 | 0.322 | -- | 0.9 | -- | 0.149 | 0.182 | -- | 18.3 | 1145 | -- | -- |
| 48.72 | 0.327 | 8.57 | 0.519 | 0.761 | -- | -0.79 | -- | 0.261 | 3.3 | -- | -- | -- | -- |
| 50.7 | 0.333 | 8.57 | 0.534 | 0.756 | -- | -- | -- | 0.265 | 3.2 | -- | -- | -- | -- |
| 76.13 | 0.406 | 8.59 | 0.336 | -- | 0.841 | -- | -- | 0.194 | -- | 18.23 | 1146 | -- | -- |
| 47.55 | 0.321 | 8.6 | -- | 0.73 | 0.685 | -- | -- | 0.103 | 3.22 | 19.2 | 2697 | -- | -- |
| 83.17 | 0.426 | 8.57 | 0.566 | -- | -- | -- | -- | 0.285 | -- | -- | -- | -- | -- |
| 58.22 | 0.357 | 8.58 | -- | 0.767 | -- | -- | -- | 0.206 | 3.21 | -- | -- | -- | -- |
| 76.82 | 0.408 | 8.61 | -- | -- | 0.79 | -- | -- | 0.101 | -- | 19.1 | 2526 | -- | -- |
| 91.63 | 0.447 | 8.58 | -- | -- | -- | -- | -- | 0.222 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.58 | radiation | 1 | 1440 | > th | dose independent | rect. | 11 | 3 |
| 6 | 38.90 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 2 |
| 7 | 38.90 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 2 |
| 56 | 41.48 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 66 | 42.06 | radiation | 40 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 67 | 42.09 | temperature | 20 | 90 | > th | dose independent | rect. | 17 | 16 |
| 69 | 42.14 | radiation | 40 | 4320 | < th | dose independent | rect. | 18 | 14 |
| 73 | 42.17 | temperature | 20 | 90 | > th | dose independent | rect. | 13 | 20 |
| 76 | 42.25 | temperature | 20 | 10 | > th | dose independent | rect. | 18 | 15 |
| 77 | 42.27 | temperature | 20 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 87 | 42.49 | wind | 1 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 89 | 42.51 | temperature | 20 | 10 | < th | dose independent | rect. | 21 | 7 |
| 91 | 42.51 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 8 |
| 111 | 42.67 | temperature | 20 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 135 | 42.82 | temperature | 20 | 270 | < th | dose independent | rect. | 23 | 1 |
| 152 | 42.91 | temperature | 20 | 1440 | < th | dose independent | rect. | 23 | 1 |
| 154 | 42.92 | wind | 1 | 1440 | < th | dose independent | rect. | 6 | 1 |
| 155 | 42.92 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 20 | 6 |
| 183 | 43.07 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 196 | 43.10 | temperature | 10 | 270 | > th | dose dependent | rect. | 17 | 14 |
| 197 | 43.11 | temperature | 20 | 10 | < th | dose independent | sin | 11 | NA |
| 198 | 43.11 | temperature | 20 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 199 | 43.11 | radiation | 20 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 202 | 43.11 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 8 |
| 215 | 43.15 | temperature | 20 | 10 | < th | dose dependent | rect. | 21 | 7 |
| 240 | 43.19 | wind | 1 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 241 | 43.19 | humidity | 60 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 243 | 43.19 | humidity | 60 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 245 | 43.19 | radiation | 20 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 256 | 43.19 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 4 |
| 299 | 43.19 | humidity | 60 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 301 | 43.19 | humidity | 60 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 303 | 43.19 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 357 | 43.20 | temperature | 20 | 270 | < th | dose dependent | rect. | 23 | 2 |
| 366 | 43.23 | temperature | 20 | 10 | > th | dose independent | sin | 11 | NA |
| 411 | 43.28 | radiation | 30 | 270 | < th | dose independent | rect. | 10 | 21 |
| 435 | 43.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 11 |
| 446 | 43.33 | temperature | 20 | 10 | < th | dose dependent | sin | 11 | NA |
| 476 | 43.37 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 487 | 43.37 | radiation | 40 | 270 | < th | dose dependent | rect. | 10 | 21 |
| 491 | 43.38 | atmosphere | 1010 | 270 | < th | dose independent | rect. | 17 | 14 |
| 671 | 43.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 19 | 8 |
| 675 | 43.54 | atmosphere | 1005 | 270 | > th | dose independent | rect. | 23 | 1 |
| 776 | 43.64 | temperature | 20 | 10 | < th | dose dependent | rect. | 16 | 16 |
| 789 | 43.65 | radiation | 1 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 849 | 43.69 | temperature | 20 | 10 | < th | dose independent | rect. | 16 | 12 |
| 853 | 43.69 | temperature | 30 | 270 | < th | dose dependent | rect. | 20 | 5 |
| 870 | 43.70 | atmosphere | 1000 | 90 | > th | dose dependent | rect. | 22 | 7 |
| 907 | 43.73 | temperature | 20 | 1440 | < th | dose independent | sin | 11 | NA |
| 910 | 43.73 | humidity | 60 | 14400 | > th | dose independent | rect. | 23 | 9 |
| 934 | 43.75 | temperature | 20 | 1440 | > th | dose independent | sin | 10 | NA |
| 955 | 43.76 | radiation | 40 | 270 | < th | dose independent | rect. | 11 | 9 |
| 970 | 43.77 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |