Os06g0154500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MAP kinase 5.
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Os06g0154500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MAP kinase 5.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.21 | 0.2 | 11.2 | -0.235 | 0.36 | 1.14 | 0.24 | 0.442 | 0.0495 | 23.2 | 0.4926 | 702 | -- | -- |
| 18.5 | 0.2 | 11.2 | -0.215 | 0.359 | 1.09 | 0.23 | -- | 0.0469 | 23.8 | 0.4907 | 701 | -- | -- |
| 18.44 | 0.2 | 11.2 | -0.246 | 0.354 | 1.12 | -- | 0.44 | 0.0491 | 23.4 | 0.48 | 698 | -- | -- |
| 18.77 | 0.202 | 11.2 | -0.231 | 0.347 | 1.08 | -- | -- | 0.0543 | 23.8 | 0.5 | 695 | -- | -- |
| 20.52 | 0.211 | 11.2 | -0.209 | -- | 1.03 | -- | 0.793 | 0.041 | -- | 0.4999 | 571 | -- | -- |
| 20.31 | 0.211 | 11.2 | -0.317 | 0.983 | -- | 0.411 | -- | 0.00491 | 4.1 | -- | -- | -- | -- |
| 20.79 | 0.214 | 11.2 | -0.322 | 0.985 | -- | -- | -- | 0.00263 | 4.11 | -- | -- | -- | -- |
| 20.34 | 0.21 | 11.2 | -0.243 | -- | 1.01 | -- | -- | 0.048 | -- | 0.4955 | 545 | -- | -- |
| 20.19 | 0.209 | 11.2 | -- | 0.366 | 1.12 | -- | -- | 0.0788 | 23.5 | 0.4644 | 706 | -- | -- |
| 73.53 | 0.401 | 11.2 | -0.282 | -- | -- | -- | -- | 0.0289 | -- | -- | -- | -- | -- |
| 23.52 | 0.227 | 11.2 | -- | 0.979 | -- | -- | -- | 0.0385 | 4.12 | -- | -- | -- | -- |
| 21.92 | 0.218 | 11.2 | -- | -- | 1.01 | -- | -- | 0.0655 | -- | 0.5 | 548 | -- | -- |
| 75.62 | 0.406 | 11.2 | -- | -- | -- | -- | -- | 0.0602 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.03 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 3 | 16.08 | humidity | 60.0 | 270 | > th | dose independent | rect. | 16 | 14 |
| 6 | 16.30 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 18 |
| 7 | 16.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 20 |
| 8 | 16.35 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 14 |
| 14 | 16.62 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 14 |
| 22 | 16.73 | radiation | 1.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 23 | 16.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 6 |
| 24 | 16.74 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 18 |
| 33 | 16.83 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 17 |
| 34 | 16.84 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 39 | 16.88 | radiation | 1.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 41 | 16.88 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 45 | 16.94 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 9 | 16 |
| 54 | 16.99 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 16 | 14 |
| 55 | 16.99 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 20 |
| 60 | 17.03 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 20 |
| 73 | 17.10 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 10 |
| 79 | 17.13 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 90 | 17.17 | radiation | 1.0 | 720 | < th | dose independent | rect. | 17 | 12 |
| 93 | 17.17 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 21 | 5 |
| 105 | 17.19 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 15 | 5 |
| 106 | 17.20 | humidity | 60.0 | 270 | > th | dose independent | rect. | 15 | 5 |
| 110 | 17.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 111 | 17.20 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 16 |
| 119 | 17.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 1 |
| 130 | 17.25 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 17 | 12 |
| 135 | 17.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 8 |
| 146 | 17.28 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 17 | 2 |
| 147 | 17.28 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 18 | 15 |
| 151 | 17.29 | humidity | 70.0 | 10 | > th | dose independent | rect. | 18 | 15 |
| 153 | 17.29 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 10 |
| 158 | 17.30 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 8 |
| 163 | 17.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 11 |
| 166 | 17.31 | radiation | 1.0 | 270 | < th | dose dependent | sin | 0 | NA |
| 168 | 17.31 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 23 | 5 |
| 169 | 17.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 11 |
| 175 | 17.31 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 20 |
| 193 | 17.34 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 18 |
| 197 | 17.35 | radiation | 1.0 | 90 | > th | dose independent | sin | 23 | NA |
| 213 | 17.37 | radiation | 1.0 | 90 | < th | dose independent | sin | 23 | NA |
| 225 | 17.38 | radiation | 1.0 | 90 | > th | dose independent | rect. | 7 | 12 |
| 226 | 17.38 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 248 | 17.39 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 17 | 2 |
| 262 | 17.41 | humidity | 70.0 | 270 | > th | dose independent | rect. | 17 | 2 |
| 265 | 17.41 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 11 |
| 272 | 17.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 17 | 2 |
| 286 | 17.44 | humidity | 50.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 287 | 17.44 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 292 | 17.44 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 15 | 8 |
| 295 | 17.44 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 20 |
| 296 | 17.45 | temperature | 15.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 316 | 17.47 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 23 | 1 |
| 328 | 17.48 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 336 | 17.48 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 4 |
| 340 | 17.49 | wind | 7.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 344 | 17.49 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 6 |
| 345 | 17.49 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 6 |
| 346 | 17.49 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 367 | 17.51 | humidity | 70.0 | 30 | > th | dose independent | rect. | 13 | 10 |
| 368 | 17.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 11 |
| 369 | 17.51 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 11 |
| 370 | 17.51 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 13 |
| 391 | 17.52 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 392 | 17.52 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 395 | 17.52 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 3 |
| 396 | 17.52 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 3 |
| 404 | 17.52 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 406 | 17.52 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 417 | 17.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 3 |
| 418 | 17.53 | temperature | 15.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 422 | 17.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 3 |
| 449 | 17.55 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 472 | 17.57 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 13 |
| 473 | 17.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 474 | 17.57 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 475 | 17.57 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 17 | 2 |
| 482 | 17.57 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 486 | 17.58 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 487 | 17.58 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 490 | 17.58 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 5 |
| 491 | 17.58 | radiation | 1.0 | 270 | < th | dose independent | rect. | 21 | 5 |
| 496 | 17.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 5 |
| 497 | 17.58 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 6 |
| 499 | 17.58 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 501 | 17.58 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 506 | 17.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 516 | 17.59 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 21 |
| 532 | 17.60 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 24 | 4 |
| 557 | 17.62 | humidity | 70.0 | 30 | > th | dose independent | rect. | 4 | 19 |
| 559 | 17.62 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 6 |
| 565 | 17.63 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 1 |
| 720 | 17.69 | humidity | 70.0 | 30 | > th | dose independent | rect. | 14 | 19 |
| 744 | 17.70 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 747 | 17.70 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 768 | 17.71 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 6 |
| 783 | 17.71 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 21 |
| 809 | 17.72 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 19 |
| 813 | 17.72 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 22 | 3 |
| 846 | 17.74 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 17 | 6 |
| 898 | 17.76 | radiation | 1.0 | 720 | > th | dose independent | rect. | 14 | 5 |
| 917 | 17.76 | radiation | 40.0 | 270 | < th | dose independent | rect. | 1 | 20 |
| 957 | 17.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 14 | 4 |