Os06g0152700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF821, CAP10-like family protein.
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Os06g0152700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF821, CAP10-like family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 106.17 | 0.484 | 8.62 | 1.89 | 0.756 | 0.259 | 0.446 | 1.21 | 0.787 | 9.33 | 72 | 20 | -- | -- |
| 112.83 | 0.495 | 8.6 | 1.97 | 0.763 | 0.263 | 0.0827 | -- | 0.816 | 9.19 | 71 | 19 | -- | -- |
| 106.77 | 0.481 | 8.62 | 1.91 | 0.755 | 0.262 | -- | 1.06 | 0.789 | 9.33 | 72.39 | 23 | -- | -- |
| 112.62 | 0.494 | 8.61 | 1.93 | 0.762 | 0.26 | -- | -- | 0.796 | 9.17 | 71.59 | 19 | -- | -- |
| 138.24 | 0.548 | 8.64 | 1.89 | -- | 0.153 | -- | 1.13 | 0.804 | -- | 71.84 | 43 | -- | -- |
| 115.79 | 0.504 | 8.62 | 1.89 | 0.745 | -- | 0.121 | -- | 0.794 | 8.01 | -- | -- | -- | -- |
| 115.83 | 0.504 | 8.62 | 1.9 | 0.744 | -- | -- | -- | 0.794 | 8.04 | -- | -- | -- | -- |
| 133.07 | 0.537 | 8.61 | 1.91 | -- | 0.503 | -- | -- | 0.848 | -- | 74.07 | 602 | -- | -- |
| 208.93 | 0.673 | 8.66 | -- | 0.761 | 0.195 | -- | -- | 0.582 | 8.47 | 67.81 | 7 | -- | -- |
| 146.13 | 0.565 | 8.63 | 1.9 | -- | -- | -- | -- | 0.803 | -- | -- | -- | -- | -- |
| 210.78 | 0.679 | 8.66 | -- | 0.756 | -- | -- | -- | 0.582 | 7.86 | -- | -- | -- | -- |
| 234.12 | 0.713 | 8.7 | -- | -- | 0.344 | -- | -- | 0.478 | -- | 74.98 | 559 | -- | -- |
| 241.85 | 0.726 | 8.68 | -- | -- | -- | -- | -- | 0.592 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.41 | radiation | 10.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 3 | 105.87 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 4 | 105.98 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 16 | 15 |
| 5 | 106.04 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 7 | 106.14 | temperature | 30.0 | 270 | < th | dose independent | rect. | 16 | 15 |
| 9 | 106.18 | temperature | 25.0 | 10 | < th | dose independent | rect. | 24 | 10 |
| 12 | 106.27 | humidity | 50.0 | 270 | > th | dose independent | rect. | 16 | 15 |
| 19 | 106.39 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 27 | 106.54 | temperature | 25.0 | 10 | < th | dose independent | sin | 6 | NA |
| 33 | 106.61 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 18 |
| 42 | 106.76 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 24 | 4 |
| 52 | 106.86 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 21 |
| 53 | 106.87 | humidity | 70.0 | 10 | < th | dose independent | rect. | 16 | 23 |
| 68 | 106.99 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 9 |
| 101 | 107.14 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 105 | 107.16 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 10 |
| 113 | 107.21 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 21 | 6 |
| 120 | 107.24 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 16 | 22 |
| 124 | 107.26 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 12 |
| 127 | 107.27 | wind | 5.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 141 | 107.31 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 11 |
| 145 | 107.32 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 149 | 107.34 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 4 |
| 152 | 107.35 | wind | 5.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 161 | 107.38 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 9 |
| 175 | 107.42 | wind | 5.0 | 14400 | < th | dose independent | rect. | 16 | 5 |
| 182 | 107.44 | radiation | 20.0 | 270 | < th | dose independent | rect. | 11 | 21 |
| 186 | 107.44 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 11 | 21 |
| 192 | 107.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 10 |
| 195 | 107.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 199 | 107.49 | wind | 5.0 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 217 | 107.54 | wind | 9.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 222 | 107.55 | wind | 9.0 | 10 | < th | dose dependent | rect. | 4 | 10 |
| 232 | 107.57 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 12 |
| 243 | 107.60 | humidity | 90.0 | 10 | > th | dose independent | sin | 6 | NA |
| 248 | 107.60 | humidity | 70.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 250 | 107.61 | temperature | 20.0 | 30 | > th | dose independent | rect. | 4 | 10 |
| 260 | 107.63 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 10 |
| 270 | 107.65 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 278 | 107.66 | wind | 9.0 | 10 | < th | dose independent | rect. | 4 | 21 |
| 279 | 107.66 | humidity | 70.0 | 10 | > th | dose independent | rect. | 13 | 23 |
| 289 | 107.67 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 10 |
| 301 | 107.68 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 16 | 22 |
| 305 | 107.69 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 21 | 6 |
| 308 | 107.70 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 325 | 107.73 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 19 |
| 331 | 107.74 | radiation | 1.0 | 90 | > th | dose independent | rect. | 9 | 10 |
| 348 | 107.75 | humidity | 90.0 | 10 | > th | dose independent | rect. | 24 | 18 |
| 351 | 107.75 | humidity | 70.0 | 10 | > th | dose independent | rect. | 23 | 23 |
| 358 | 107.76 | wind | 3.0 | 720 | < th | dose dependent | rect. | 2 | 8 |
| 366 | 107.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 373 | 107.78 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 23 |
| 387 | 107.80 | humidity | 70.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 396 | 107.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 405 | 107.81 | radiation | 10.0 | 270 | < th | dose independent | rect. | 15 | 21 |
| 424 | 107.83 | wind | 5.0 | 14400 | > th | dose independent | sin | 17 | NA |
| 431 | 107.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 10 |
| 432 | 107.84 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 435 | 107.84 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 436 | 107.84 | radiation | 40.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 452 | 107.86 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 11 |
| 454 | 107.86 | humidity | 90.0 | 10 | < th | dose independent | rect. | 4 | 20 |
| 468 | 107.88 | wind | 7.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 480 | 107.88 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 23 |
| 481 | 107.88 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 484 | 107.89 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 485 | 107.89 | humidity | 80.0 | 10 | > th | dose independent | rect. | 1 | 3 |
| 490 | 107.89 | radiation | 1.0 | 720 | > th | dose independent | rect. | 18 | 12 |
| 496 | 107.89 | wind | 3.0 | 720 | < th | dose dependent | rect. | 2 | 11 |
| 518 | 107.92 | humidity | 70.0 | 10 | > th | dose independent | no | NA | NA |
| 522 | 107.92 | humidity | 70.0 | 10 | > th | dose independent | rect. | 15 | 23 |
| 539 | 107.94 | humidity | 70.0 | 10 | > th | dose independent | rect. | 17 | 21 |
| 549 | 107.95 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 21 |
| 561 | 107.96 | humidity | 90.0 | 10 | > th | dose independent | rect. | 21 | 15 |
| 567 | 107.96 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 20 |
| 569 | 107.97 | wind | 5.0 | 14400 | < th | dose independent | sin | 17 | NA |
| 575 | 107.98 | wind | 7.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 578 | 107.98 | humidity | 70.0 | 10 | > th | dose independent | rect. | 11 | 23 |
| 581 | 107.98 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 13 | 8 |
| 590 | 107.99 | temperature | 20.0 | 270 | > th | dose independent | rect. | 8 | 18 |
| 592 | 107.99 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 8 | 15 |
| 606 | 108.00 | humidity | 70.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 607 | 108.00 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 3 |
| 646 | 108.03 | wind | 5.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 675 | 108.05 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 23 | 23 |
| 677 | 108.06 | wind | 7.0 | 10 | < th | dose independent | rect. | 4 | 10 |
| 680 | 108.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 14 |
| 681 | 108.06 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 23 |
| 682 | 108.06 | wind | 3.0 | 720 | < th | dose dependent | rect. | 3 | 3 |
| 685 | 108.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 14 |
| 696 | 108.07 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 8 | 11 |
| 713 | 108.08 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 24 | 11 |
| 728 | 108.10 | temperature | 25.0 | 10 | > th | dose independent | sin | 5 | NA |
| 743 | 108.11 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 21 | 6 |
| 749 | 108.11 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 20 |
| 751 | 108.11 | humidity | 70.0 | 10 | > th | dose independent | rect. | 3 | 21 |
| 763 | 108.12 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 768 | 108.13 | humidity | 90.0 | 10 | < th | dose independent | sin | 4 | NA |
| 798 | 108.15 | humidity | 80.0 | 270 | > th | dose independent | rect. | 23 | 3 |
| 815 | 108.16 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 4 | 21 |
| 819 | 108.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 831 | 108.17 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 835 | 108.18 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 4 | 21 |
| 837 | 108.18 | radiation | 10.0 | 270 | > th | dose independent | rect. | 13 | 23 |
| 843 | 108.18 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 845 | 108.18 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 4 | 21 |
| 848 | 108.19 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 3 |
| 858 | 108.19 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 21 | 8 |
| 864 | 108.19 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 21 | 22 |
| 890 | 108.21 | radiation | 10.0 | 270 | < th | dose independent | rect. | 23 | 23 |
| 921 | 108.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 22 | 4 |
| 933 | 108.23 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 4 | 21 |
| 952 | 108.24 | humidity | 90.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 972 | 108.25 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 1 |
| 986 | 108.26 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 17 | 4 |