Os06g0151700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein kinase-like domain containing protein.
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Os06g0151700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein kinase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 212.44 | 0.685 | 4.11 | 2.42 | 1.22 | 0.668 | 0.889 | 4.31 | 0.531 | 23.2 | 19.15 | 22143 | -- | -- |
| 241.92 | 0.724 | 4.17 | 2.78 | 1.23 | 0.767 | 0.893 | -- | 0.65 | 23.3 | 21.88 | 17795 | -- | -- |
| 215.81 | 0.684 | 4.11 | 2.39 | 1.21 | 0.672 | -- | 4.33 | 0.529 | 23.3 | 19.14 | 22140 | -- | -- |
| 244.49 | 0.728 | 4.15 | 2.85 | 1.21 | 0.794 | -- | -- | 0.675 | 23.2 | 20.01 | 17787 | -- | -- |
| 306.75 | 0.816 | 4.11 | 2.43 | -- | 0.62 | -- | 4.35 | 0.512 | -- | 17.02 | 22024 | -- | -- |
| 266.02 | 0.765 | 4.23 | 2.79 | 1.19 | -- | 0.895 | -- | 0.37 | 23.2 | -- | -- | -- | -- |
| 269.44 | 0.769 | 4.23 | 2.75 | 1.18 | -- | -- | -- | 0.366 | 23.3 | -- | -- | -- | -- |
| 319.71 | 0.836 | 4.21 | 2.81 | -- | 0.661 | -- | -- | 0.344 | -- | 17.02 | 22024 | -- | -- |
| 388.11 | 0.918 | 4.27 | -- | 1.07 | 1.33 | -- | -- | 0.11 | 23.6 | 29.34 | 30949 | -- | -- |
| 357.25 | 0.883 | 4.2 | 2.78 | -- | -- | -- | -- | 0.377 | -- | -- | -- | -- | -- |
| 469.18 | 1.01 | 4.3 | -- | 1.21 | -- | -- | -- | 0.0596 | 23.4 | -- | -- | -- | -- |
| 461.57 | 1 | 4.31 | -- | -- | 1.68 | -- | -- | -0.00685 | -- | 40 | 34934 | -- | -- |
| 561.47 | 1.11 | 4.27 | -- | -- | -- | -- | -- | 0.0686 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 207.78 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 2 | 207.78 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 3 | 207.87 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 18 | 209.32 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 19 | 209.64 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 33 | 210.47 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 12 | 5 |
| 34 | 210.59 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 35 | 210.59 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 5 |
| 36 | 210.66 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 37 | 210.70 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 40 | 210.92 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 43 | 210.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 6 |
| 53 | 211.14 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 22 | 10 |
| 54 | 211.15 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 122 | 212.44 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 7 | 1 |
| 123 | 212.44 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 20 |
| 157 | 212.77 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 161 | 213.00 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 2 |
| 163 | 213.25 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 4 |
| 192 | 213.84 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 193 | 213.84 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 1 | 2 |
| 206 | 214.22 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 229 | 214.28 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 24 | 9 |
| 240 | 214.31 | radiation | 30.0 | 14400 | < th | dose dependent | rect. | 2 | 7 |
| 290 | 214.61 | radiation | 40.0 | 4320 | > th | dose independent | rect. | 14 | 19 |
| 294 | 214.62 | radiation | 20.0 | 14400 | < th | dose independent | sin | 10 | NA |
| 303 | 214.66 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 2 |
| 323 | 214.76 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 324 | 214.77 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 328 | 214.83 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 333 | 214.87 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 420 | 215.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 421 | 215.37 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 8 | 8 |
| 422 | 215.38 | radiation | 20.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 423 | 215.38 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 428 | 215.44 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 446 | 215.48 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 456 | 215.56 | humidity | 50.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 498 | 215.81 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 516 | 215.85 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 6 | 8 |
| 518 | 215.85 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 9 | 7 |
| 546 | 215.93 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 558 | 215.99 | radiation | 10.0 | 14400 | < th | dose independent | rect. | 24 | 14 |
| 572 | 216.04 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 8 | 12 |
| 575 | 216.08 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 8 | 12 |
| 577 | 216.08 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 8 | 12 |
| 579 | 216.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 580 | 216.12 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 582 | 216.12 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 607 | 216.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 610 | 216.23 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 620 | 216.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 5 |
| 667 | 216.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 685 | 216.39 | radiation | 40.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 736 | 216.47 | radiation | 10.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 859 | 216.83 | radiation | 10.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 911 | 216.97 | radiation | 30.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 930 | 216.99 | radiation | 20.0 | 14400 | < th | dose independent | rect. | 12 | 21 |
| 933 | 217.00 | radiation | 40.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 938 | 217.02 | radiation | 40.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 958 | 217.05 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 959 | 217.05 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 964 | 217.07 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 4 |
| 965 | 217.07 | radiation | 20.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 981 | 217.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 3 | 1 |
| 985 | 217.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 993 | 217.14 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 3 | 1 |