Os06g0151100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os06g0151100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.84 | 0.7 | 8.51 | 0.409 | 1.1 | -1.25 | 0.125 | -1.97 | -1.34 | 19.5 | 0.2098 | 6735 | -- | -- |
| 227.36 | 0.702 | 8.51 | 0.263 | 1.09 | -1.23 | 0.15 | -- | -1.37 | 19.5 | 0.3685 | 6767 | -- | -- |
| 221.87 | 0.694 | 8.51 | 0.408 | 1.1 | -1.25 | -- | -1.99 | -1.34 | 19.5 | 0.2092 | 6731 | -- | -- |
| 227.38 | 0.702 | 8.5 | 0.254 | 1.11 | -1.26 | -- | -- | -1.36 | 19.5 | 0.3789 | 6762 | -- | -- |
| 286.88 | 0.789 | 8.49 | 0.395 | -- | -1.25 | -- | -2.07 | -1.36 | -- | 0.2394 | 6759 | -- | -- |
| 264.85 | 0.763 | 8.46 | 0.132 | 1.11 | -- | 0.279 | -- | -1.17 | 19.5 | -- | -- | -- | -- |
| 265.06 | 0.762 | 8.46 | 0.125 | 1.11 | -- | -- | -- | -1.17 | 19.6 | -- | -- | -- | -- |
| 293.1 | 0.797 | 8.48 | 0.239 | -- | -1.23 | -- | -- | -1.38 | -- | 0.2418 | 6882 | -- | -- |
| 229.1 | 0.705 | 8.51 | -- | 1.11 | -1.23 | -- | -- | -1.39 | 19.5 | 0.3503 | 6762 | -- | -- |
| 331.45 | 0.851 | 8.43 | 0.109 | -- | -- | -- | -- | -1.19 | -- | -- | -- | -- | -- |
| 265.47 | 0.762 | 8.46 | -- | 1.11 | -- | -- | -- | -1.18 | 19.6 | -- | -- | -- | -- |
| 294.59 | 0.799 | 8.48 | -- | -- | -1.2 | -- | -- | -1.4 | -- | 0.5 | 6882 | -- | -- |
| 331.76 | 0.85 | 8.43 | -- | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 218.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 17 |
| 2 | 218.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 17 |
| 3 | 218.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 17 |
| 4 | 218.61 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 1 | 19 |
| 5 | 218.61 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 1 | 19 |
| 6 | 218.67 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 1 | 19 |
| 9 | 218.72 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 10 | 218.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 4 |
| 18 | 218.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 4 |
| 19 | 218.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 4 |
| 27 | 219.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 30 | 219.41 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 7 |
| 32 | 219.41 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 7 |
| 35 | 219.43 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 36 | 219.43 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 37 | 219.45 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 7 |
| 41 | 219.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 13 |
| 45 | 219.58 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 1 | 16 |
| 60 | 219.82 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 67 | 219.88 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 24 | 20 |
| 72 | 219.94 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 11 |
| 74 | 219.94 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 11 |
| 75 | 219.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 11 |
| 82 | 219.98 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 84 | 219.98 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 87 | 220.04 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 94 | 220.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 101 | 220.31 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 135 | 220.59 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 5 |
| 137 | 220.59 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 5 |
| 143 | 220.68 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 3 |
| 151 | 220.77 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 4 |
| 170 | 220.86 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 3 | NA |
| 171 | 220.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 172 | 220.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 177 | 220.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 180 | 221.01 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 183 | 221.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 186 | 221.06 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 187 | 221.09 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 3 |
| 188 | 221.09 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 196 | 221.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 15 |
| 197 | 221.36 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 249 | 221.85 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 274 | 222.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 309 | 222.28 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 11 |
| 312 | 222.28 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 11 |
| 332 | 222.37 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 337 | 222.39 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 339 | 222.40 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 401 | 222.80 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 440 | 222.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 445 | 223.00 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 16 |
| 470 | 223.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 484 | 223.18 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 498 | 223.24 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 501 | 223.26 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 527 | 223.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 9 |
| 538 | 223.50 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 554 | 223.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 557 | 223.57 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 19 |
| 570 | 223.62 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 19 |
| 574 | 223.62 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 19 |
| 577 | 223.64 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 641 | 223.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 11 |
| 643 | 223.81 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 2 |
| 687 | 223.92 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 3 | 23 |
| 697 | 223.95 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 3 | 23 |
| 701 | 223.95 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 3 | 23 |
| 710 | 223.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 23 |
| 733 | 224.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 734 | 224.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 23 |
| 737 | 224.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 23 |
| 800 | 224.19 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 802 | 224.20 | precipitation | 0.1 | 14400 | > th | dose independent | no | NA | NA |
| 803 | 224.20 | precipitation | 0.1 | 14400 | < th | dose independent | no | NA | NA |
| 805 | 224.20 | precipitation | 0.1 | 14400 | < th | dose dependent | no | NA | NA |
| 806 | 224.21 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 23 |
| 809 | 224.21 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 23 |
| 821 | 224.23 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 828 | 224.23 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 23 |
| 830 | 224.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 23 |
| 849 | 224.27 | humidity | 50.0 | 14400 | > th | dose dependent | rect. | 11 | 4 |
| 900 | 224.39 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 907 | 224.41 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 935 | 224.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 939 | 224.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 940 | 224.48 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 3 |
| 941 | 224.48 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 16 | 5 |
| 944 | 224.48 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 23 |