Os06g0150600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transferase family protein.
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Os06g0150600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transferase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 129.61 | 0.535 | 7.97 | 1.21 | 1.65 | 2.87 | 0.88 | 0.22 | -0.0124 | 6.9 | 25.78 | 1560 | -- | -- |
| 129.63 | 0.53 | 7.96 | 1.25 | 1.63 | 2.84 | 0.882 | -- | -0.00281 | 6.92 | 25.85 | 1590 | -- | -- |
| 131.58 | 0.534 | 7.97 | 1.23 | 1.64 | 2.87 | -- | 0.194 | -0.0146 | 6.91 | 25.69 | 1578 | -- | -- |
| 131.61 | 0.534 | 7.96 | 1.27 | 1.64 | 2.86 | -- | -- | -0.00407 | 6.91 | 25.74 | 1579 | -- | -- |
| 162.62 | 0.594 | 8.01 | 1.37 | -- | 3.79 | -- | -0.199 | -0.00118 | -- | 32.71 | 509 | -- | -- |
| 241.05 | 0.728 | 8.1 | 0.374 | 1.62 | -- | 1.02 | -- | -0.627 | 6.97 | -- | -- | -- | -- |
| 243.74 | 0.731 | 8.11 | 0.392 | 1.62 | -- | -- | -- | -0.629 | 6.97 | -- | -- | -- | -- |
| 162.71 | 0.594 | 8.01 | 1.29 | -- | 3.76 | -- | -- | -0.0151 | -- | 32.58 | 503 | -- | -- |
| 168.21 | 0.604 | 8 | -- | 1.64 | 2.31 | -- | -- | -0.231 | 6.81 | 26.39 | 1572 | -- | -- |
| 381.77 | 0.913 | 8.14 | 0.426 | -- | -- | -- | -- | -0.599 | -- | -- | -- | -- | -- |
| 247.8 | 0.736 | 8.12 | -- | 1.63 | -- | -- | -- | -0.673 | 6.95 | -- | -- | -- | -- |
| 202.27 | 0.662 | 8.06 | -- | -- | 3.31 | -- | -- | -0.232 | -- | 33.34 | 490 | -- | -- |
| 386.55 | 0.918 | 8.15 | -- | -- | -- | -- | -- | -0.646 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 124.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 14 |
| 17 | 125.82 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 19 | 125.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 37 | 126.31 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 67 | 127.10 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 78 | 127.28 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 7 |
| 91 | 127.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 13 |
| 101 | 127.54 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 11 |
| 107 | 127.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 132 | 127.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 4 |
| 200 | 128.11 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 262 | 128.44 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 302 | 128.69 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 316 | 128.77 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 325 | 128.81 | temperature | 10 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 356 | 128.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 497 | 129.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 576 | 129.78 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 1 |
| 673 | 130.13 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 741 | 130.42 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 785 | 130.56 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 801 | 130.65 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 814 | 130.68 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 820 | 130.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 920 | 131.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |