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Os06g0149300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0171) R2 : 0.11
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.27 (0.036) R2dN8 : 0.142 R2N8 : 0.11
σ : 0.322
deviance : 47.51
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.85 0.22 12.2 -0.443 0.638 0.425 -0.0676 0.163 -0.308 20.4 13.42 10 -- --
21.9 0.218 12.2 -0.439 0.637 0.418 -0.127 -- -0.307 20.3 13.18 9 -- --
21.86 0.218 12.2 -0.443 0.639 0.428 -- 0.199 -0.308 20.4 13.27 9 -- --
21.95 0.218 12.2 -0.436 0.638 0.421 -- -- -0.307 20.4 13.05 9 -- --
28.12 0.247 12.2 -0.572 -- 0.625 -- -0.433 -0.404 -- -5.097 846 -- --
24.84 0.234 12.2 -0.436 0.573 -- -0.2 -- -0.309 19.3 -- -- -- --
24.95 0.234 12.2 -0.432 0.572 -- -- -- -0.31 19.3 -- -- -- --
28.21 0.247 12.2 -0.484 -- 0.623 -- -- -0.388 -- -21.61 850 -- --
26.93 0.242 12.2 -- 0.633 0.416 -- -- -0.258 20.3 14.8 9 -- --
42.37 0.304 12.2 -0.442 -- -- -- -- -0.319 -- -- -- -- --
29.86 0.256 12.2 -- 0.577 -- -- -- -0.262 19.3 -- -- -- --
34.36 0.273 12.2 -- -- 0.591 -- -- -0.342 -- -0.0003508 840 -- --
47.51 0.322 12.2 -- -- -- -- -- -0.27 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 20.41 radiation 40.0 10 < th dose independent rect. 4 16
2 20.60 atmosphere 1000.0 90 > th dose independent rect. 3 16
3 20.68 atmosphere 1000.0 90 > th dose independent rect. 14 18
5 20.70 atmosphere 1000.0 10 > th dose independent rect. 14 19
8 20.84 atmosphere 1000.0 270 > th dose independent rect. 11 9
10 20.85 atmosphere 1000.0 10 > th dose independent rect. 12 21
12 20.88 atmosphere 1000.0 270 > th dose independent rect. 12 18
19 20.90 radiation 40.0 10 > th dose independent rect. 13 23
21 20.91 radiation 1.0 10 > th dose dependent rect. 8 6
25 20.92 atmosphere 1015.0 10 < th dose dependent rect. 9 5
27 20.94 atmosphere 1015.0 90 < th dose dependent rect. 8 7
28 20.95 atmosphere 1000.0 10 > th dose independent rect. 4 16
30 20.95 temperature 10.0 270 > th dose dependent rect. 19 17
37 20.96 wind 9.0 90 < th dose dependent rect. 8 19
39 20.97 humidity 50.0 270 > th dose independent rect. 6 21
42 20.98 temperature 30.0 270 < th dose dependent rect. 3 2
43 20.98 radiation 30.0 270 < th dose dependent rect. 1 12
48 21.01 humidity 90.0 270 < th dose independent rect. 9 1
49 21.02 humidity 60.0 270 > th dose independent rect. 17 9
50 21.03 temperature 20.0 90 > th dose independent rect. 8 6
51 21.03 humidity 90.0 90 < th dose independent rect. 8 6
52 21.03 radiation 40.0 90 < th dose independent rect. 3 16
53 21.03 humidity 50.0 270 > th dose independent rect. 7 18
55 21.04 wind 9.0 90 < th dose independent rect. 8 19
59 21.06 temperature 15.0 90 > th dose independent rect. 8 19
66 21.07 wind 9.0 90 < th dose dependent rect. 19 8
69 21.08 radiation 1.0 270 < th dose dependent rect. 3 8
76 21.10 temperature 15.0 270 > th dose independent rect. 6 8
77 21.10 radiation 1.0 270 < th dose independent rect. 3 9
80 21.10 radiation 1.0 270 > th dose dependent rect. 6 6
82 21.11 wind 5.0 90 < th dose independent rect. 19 8
102 21.12 wind 9.0 270 < th dose dependent rect. 17 8
115 21.15 radiation 1.0 10 > th dose dependent rect. 9 3
116 21.15 temperature 30.0 90 < th dose dependent rect. 3 6
123 21.17 radiation 1.0 270 > th dose independent rect. 6 8
130 21.17 temperature 10.0 90 > th dose dependent rect. 8 6
131 21.18 temperature 20.0 10 > th dose independent rect. 9 5
132 21.18 humidity 90.0 10 < th dose independent rect. 9 5
135 21.18 precipitation 0.1 90 < th dose independent rect. 8 19
139 21.18 precipitation 0.1 90 < th dose dependent rect. 8 19
140 21.19 wind 7.0 90 < th dose independent rect. 3 5
141 21.19 temperature 30.0 270 < th dose independent rect. 17 9
145 21.20 humidity 90.0 270 < th dose independent rect. 8 4
147 21.20 temperature 10.0 90 > th dose independent rect. 3 5
149 21.20 temperature 30.0 90 < th dose independent rect. 3 5
150 21.20 humidity 50.0 90 > th dose independent rect. 3 5
153 21.20 atmosphere 995.0 90 > th dose independent rect. 3 5
154 21.20 atmosphere 1015.0 90 < th dose independent rect. 3 5
163 21.21 radiation 40.0 90 < th dose independent rect. 3 5
171 21.22 precipitation 0.1 90 < th dose independent rect. 3 5
178 21.22 precipitation 0.1 90 < th dose dependent rect. 3 5
184 21.22 radiation 20.0 10 > th dose dependent rect. 13 23
190 21.24 atmosphere 1015.0 270 < th dose dependent rect. 9 1
191 21.24 temperature 10.0 10 > th dose dependent rect. 9 5
196 21.25 radiation 1.0 270 < th dose independent rect. 3 3
198 21.25 wind 9.0 270 < th dose independent rect. 5 22
205 21.26 atmosphere 1015.0 90 < th dose independent rect. 8 19
217 21.27 radiation 40.0 10 < th dose dependent rect. 4 16
233 21.28 radiation 1.0 270 < th dose dependent rect. 3 3
239 21.29 wind 9.0 90 < th dose independent rect. 8 6
240 21.29 wind 9.0 270 < th dose independent rect. 6 8
241 21.29 precipitation 0.1 270 < th dose independent rect. 5 22
242 21.29 temperature 30.0 270 < th dose dependent rect. 1 6
245 21.29 radiation 40.0 90 < th dose dependent rect. 3 16
246 21.29 precipitation 0.1 270 < th dose dependent rect. 5 22
251 21.30 wind 9.0 270 < th dose dependent rect. 6 20
258 21.31 radiation 30.0 270 < th dose dependent rect. 1 7
266 21.33 precipitation 0.1 270 < th dose independent rect. 17 9
272 21.33 precipitation 0.1 270 < th dose dependent rect. 17 9
278 21.34 temperature 25.0 270 < th dose independent rect. 3 2
298 21.35 wind 9.0 10 < th dose independent rect. 9 5
302 21.35 radiation 10.0 270 < th dose dependent rect. 17 9
304 21.35 radiation 40.0 270 < th dose dependent rect. 1 16
311 21.36 precipitation 0.1 10 < th dose independent rect. 9 19
314 21.36 temperature 30.0 10 < th dose dependent rect. 4 5
328 21.36 precipitation 0.1 10 < th dose dependent rect. 9 19
333 21.37 radiation 20.0 270 < th dose independent rect. 1 7
335 21.37 radiation 30.0 90 < th dose independent rect. 3 8
345 21.38 wind 1.0 90 > th dose independent rect. 8 6
347 21.38 radiation 1.0 90 > th dose independent rect. 8 6
348 21.38 precipitation 0.1 90 < th dose independent rect. 8 6
357 21.38 precipitation 0.1 90 < th dose dependent rect. 8 6
365 21.39 radiation 10.0 270 < th dose independent rect. 17 9
379 21.40 atmosphere 995.0 90 > th dose independent rect. 8 6
380 21.40 atmosphere 1015.0 90 < th dose independent rect. 8 6
381 21.40 precipitation 0.1 270 < th dose independent rect. 6 8
382 21.40 temperature 10.0 90 > th dose independent rect. 14 18
386 21.40 atmosphere 1015.0 270 < th dose dependent rect. 8 3
391 21.40 precipitation 0.1 270 < th dose dependent rect. 6 8
402 21.41 radiation 20.0 270 < th dose independent rect. 1 9
427 21.41 radiation 1.0 10 > th dose dependent rect. 8 23
428 21.42 wind 7.0 270 < th dose independent rect. 3 2
430 21.42 temperature 10.0 270 > th dose independent rect. 3 2
433 21.42 humidity 50.0 270 > th dose independent rect. 3 2
436 21.42 atmosphere 995.0 270 > th dose independent rect. 3 2
437 21.42 atmosphere 1010.0 270 < th dose independent rect. 3 2
439 21.42 radiation 20.0 270 < th dose independent rect. 3 2
449 21.42 temperature 10.0 270 > th dose independent rect. 5 22
450 21.42 radiation 30.0 270 < th dose dependent rect. 3 2
453 21.42 humidity 50.0 90 > th dose dependent rect. 3 5
455 21.42 humidity 90.0 90 < th dose dependent rect. 8 6
456 21.42 radiation 1.0 10 > th dose dependent rect. 6 8
463 21.43 radiation 1.0 270 > th dose independent sin 3 NA
466 21.43 wind 1.0 10 > th dose independent rect. 9 5
473 21.43 atmosphere 995.0 270 > th dose independent rect. 6 8
474 21.43 atmosphere 1015.0 270 < th dose independent rect. 6 8
477 21.43 temperature 10.0 270 > th dose independent rect. 14 16
480 21.43 radiation 40.0 90 < th dose independent rect. 14 18
481 21.43 wind 9.0 10 < th dose independent rect. 9 19
484 21.43 humidity 50.0 270 > th dose dependent rect. 3 2
498 21.44 wind 9.0 90 < th dose dependent rect. 3 5
504 21.45 radiation 1.0 270 < th dose independent sin 3 NA
524 21.46 precipitation 0.1 270 < th dose independent rect. 3 2
534 21.46 precipitation 0.1 270 < th dose dependent rect. 3 2
539 21.46 humidity 60.0 90 > th dose dependent rect. 3 14
543 21.47 radiation 1.0 10 > th dose independent rect. 9 5
548 21.47 radiation 30.0 270 < th dose dependent sin 7 NA
558 21.48 temperature 10.0 10 > th dose independent rect. 9 5
560 21.48 atmosphere 995.0 10 > th dose independent rect. 9 5
561 21.48 atmosphere 1015.0 10 < th dose independent rect. 9 5
562 21.48 precipitation 0.1 10 < th dose independent rect. 9 5
564 21.48 wind 9.0 270 < th dose independent rect. 14 16
567 21.48 wind 9.0 90 < th dose independent rect. 14 18
572 21.48 temperature 10.0 10 > th dose independent rect. 14 19
574 21.48 precipitation 0.1 10 < th dose dependent rect. 9 5
580 21.48 temperature 10.0 10 > th dose dependent rect. 22 16
589 21.49 humidity 50.0 270 > th dose independent rect. 6 8
598 21.49 temperature 10.0 270 > th dose dependent rect. 6 6
605 21.49 humidity 60.0 90 > th dose dependent rect. 3 10
606 21.49 humidity 60.0 90 > th dose dependent rect. 3 12
612 21.50 temperature 20.0 270 > th dose independent rect. 9 1
621 21.50 atmosphere 1000.0 10 > th dose independent rect. 12 10
625 21.50 radiation 40.0 10 < th dose independent rect. 14 19
628 21.50 radiation 40.0 90 < th dose dependent rect. 3 6
632 21.50 atmosphere 995.0 90 > th dose dependent rect. 3 16
674 21.52 humidity 50.0 90 > th dose independent rect. 8 6
684 21.52 wind 9.0 10 < th dose independent rect. 14 19
687 21.52 radiation 1.0 10 > th dose dependent sin 2 NA
706 21.52 wind 9.0 10 < th dose dependent rect. 9 19
724 21.53 temperature 10.0 1440 > th dose independent rect. 10 5
739 21.53 temperature 10.0 1440 > th dose independent rect. 15 19
767 21.54 temperature 10.0 270 > th dose independent rect. 17 9
773 21.54 temperature 10.0 270 > th dose independent rect. 2 15
774 21.54 atmosphere 1015.0 270 < th dose independent rect. 2 15
790 21.55 wind 9.0 10 < th dose independent rect. 4 5
791 21.55 temperature 10.0 10 > th dose independent rect. 4 5
793 21.55 temperature 30.0 10 < th dose independent rect. 4 5
794 21.55 humidity 50.0 10 > th dose independent rect. 4 5
797 21.55 atmosphere 995.0 10 > th dose independent rect. 4 5
798 21.55 atmosphere 1015.0 10 < th dose independent rect. 4 5
799 21.55 wind 9.0 270 < th dose independent rect. 1 6
803 21.55 temperature 10.0 270 > th dose independent rect. 1 6
805 21.55 temperature 30.0 270 < th dose independent rect. 1 6
806 21.55 humidity 50.0 270 > th dose independent rect. 1 6
808 21.55 atmosphere 995.0 270 > th dose independent rect. 1 6
809 21.55 atmosphere 1015.0 270 < th dose independent rect. 1 6
817 21.55 temperature 10.0 10 > th dose independent rect. 9 19
819 21.55 radiation 10.0 270 < th dose dependent sin 4 NA
836 21.56 precipitation 0.1 270 < th dose independent rect. 1 6
844 21.56 radiation 1.0 270 > th dose dependent sin 8 NA
846 21.56 precipitation 0.1 270 < th dose dependent rect. 1 6
876 21.57 humidity 50.0 270 > th dose dependent rect. 1 7
885 21.58 radiation 1.0 270 > th dose independent rect. 9 1
889 21.58 precipitation 0.1 10 < th dose independent rect. 4 5
911 21.58 radiation 40.0 10 < th dose dependent sin 1 NA
916 21.58 precipitation 0.1 10 < th dose dependent rect. 4 5
968 21.59 atmosphere 1015.0 10 < th dose independent rect. 9 18