Os06g0149100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Proline-rich protein APG-like.
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Os06g0149100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Proline-rich protein APG-like.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.6 | 0.688 | 7.36 | -3.9 | 2.03 | -0.659 | -0.626 | 3.69 | -0.422 | 4.18 | 89.59 | 52 | -- | -- |
| 235.66 | 0.72 | 7.39 | -3.71 | 2.12 | -0.631 | 1.42 | -- | -0.373 | 3.98 | 89.59 | 52 | -- | -- |
| 215.31 | 0.683 | 7.36 | -3.88 | 2.05 | -0.685 | -- | 3.31 | -0.423 | 4.14 | 89.5 | 46 | -- | -- |
| 240.35 | 0.722 | 7.38 | -3.75 | 2.05 | -0.627 | -- | -- | -0.352 | 4.18 | 92.49 | 34 | -- | -- |
| 308.57 | 0.818 | 7.44 | -5 | -- | 1.68 | -- | 2.4 | -0.36 | -- | 70.95 | 238 | -- | -- |
| 245.23 | 0.734 | 7.37 | -3.8 | 1.82 | -- | 1.02 | -- | -0.262 | 4.11 | -- | -- | -- | -- |
| 248.08 | 0.738 | 7.37 | -3.81 | 1.83 | -- | -- | -- | -0.268 | 4.2 | -- | -- | -- | -- |
| 274.25 | 0.771 | 7.36 | -3.79 | -- | 1.92 | -- | -- | -0.157 | -- | 60.58 | 246 | -- | -- |
| 603.18 | 1.15 | 7.32 | -- | 2.27 | -1.01 | -- | -- | -0.0485 | 4 | 89 | 26 | -- | -- |
| 428.34 | 0.967 | 7.38 | -3.73 | -- | -- | -- | -- | -0.219 | -- | -- | -- | -- | -- |
| 630.22 | 1.17 | 7.27 | -- | 1.75 | -- | -- | -- | 0.157 | 4.24 | -- | -- | -- | -- |
| 643.04 | 1.18 | 7.28 | -- | -- | 2.38 | -- | -- | 0.205 | -- | 41.71 | 245 | -- | -- |
| 796.22 | 1.32 | 7.28 | -- | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 199.48 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 6 | 202.06 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 22 | 8 |
| 8 | 202.36 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 23 | 3 |
| 14 | 203.88 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 19 |
| 15 | 203.92 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 18 | 204.02 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 21 |
| 19 | 204.06 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 22 | 204.23 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 19 |
| 42 | 205.99 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 4 | 18 |
| 44 | 206.03 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 45 | 206.04 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 55 | 206.44 | humidity | 90.0 | 30 | > th | dose independent | rect. | 24 | 6 |
| 65 | 207.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 17 | 14 |
| 72 | 207.20 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 73 | 207.23 | humidity | 80.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 77 | 207.31 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 20 |
| 89 | 207.64 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 17 | 15 |
| 94 | 207.75 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 96 | 207.75 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 9 | 20 |
| 102 | 207.94 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 14 |
| 103 | 207.97 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 104 | 207.97 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 6 | 16 |
| 109 | 208.09 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 18 |
| 115 | 208.39 | radiation | 1.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 123 | 208.69 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 126 | 208.76 | temperature | 20.0 | 90 | > th | dose independent | rect. | 24 | 5 |
| 133 | 208.86 | humidity | 70.0 | 270 | > th | dose independent | rect. | 3 | 10 |
| 139 | 209.01 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 12 |
| 158 | 209.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 24 | 2 |
| 177 | 209.56 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 10 |
| 192 | 209.65 | temperature | 30.0 | 10 | < th | dose independent | rect. | 6 | 18 |
| 199 | 209.70 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 7 |
| 211 | 209.92 | radiation | 1.0 | 90 | < th | dose independent | rect. | 23 | 7 |
| 212 | 209.92 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 225 | 210.08 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 11 |
| 229 | 210.12 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 10 |
| 251 | 210.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 21 |
| 252 | 210.53 | humidity | 80.0 | 10 | > th | dose independent | rect. | 6 | 16 |
| 262 | 210.62 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 5 |
| 271 | 210.74 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 272 | 210.75 | radiation | 1.0 | 90 | > th | dose independent | sin | 8 | NA |
| 292 | 210.97 | radiation | 1.0 | 90 | < th | dose independent | sin | 8 | NA |
| 303 | 211.12 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 5 | 7 |
| 306 | 211.15 | humidity | 80.0 | 270 | > th | dose independent | rect. | 4 | 5 |
| 313 | 211.22 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 20 |
| 336 | 211.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 11 |
| 337 | 211.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 11 |
| 351 | 211.50 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 4 | 5 |
| 359 | 211.54 | wind | 3.0 | 270 | < th | dose dependent | rect. | 23 | 3 |
| 364 | 211.60 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 5 | 18 |
| 375 | 211.71 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 386 | 211.81 | humidity | 90.0 | 10 | > th | dose dependent | sin | 7 | NA |
| 391 | 211.84 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 398 | 211.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 22 | 5 |
| 399 | 211.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 408 | 212.06 | temperature | 10.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 409 | 212.06 | temperature | 30.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 410 | 212.06 | humidity | 50.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 413 | 212.06 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 22 | 5 |
| 414 | 212.06 | radiation | 1.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 421 | 212.06 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 426 | 212.07 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 24 | 2 |
| 430 | 212.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 22 | 5 |
| 434 | 212.11 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 450 | 212.23 | temperature | 15.0 | 270 | > th | dose independent | rect. | 18 | 14 |
| 452 | 212.23 | humidity | 90.0 | 30 | > th | dose dependent | rect. | 23 | 21 |
| 453 | 212.24 | humidity | 70.0 | 90 | > th | dose independent | rect. | 5 | 10 |
| 489 | 212.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 19 |
| 490 | 212.53 | wind | 9.0 | 270 | < th | dose dependent | rect. | 22 | 5 |
| 502 | 212.60 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 5 | 4 |
| 509 | 212.65 | temperature | 15.0 | 90 | > th | dose independent | rect. | 5 | 19 |
| 532 | 212.81 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 10 |
| 538 | 212.85 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 17 | 13 |
| 543 | 212.87 | humidity | 70.0 | 270 | > th | dose independent | rect. | 13 | 20 |
| 544 | 212.88 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 6 |
| 545 | 212.88 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 546 | 212.88 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 11 |
| 547 | 212.88 | wind | 9.0 | 270 | < th | dose independent | rect. | 18 | 13 |
| 557 | 212.93 | radiation | 1.0 | 270 | < th | dose independent | sin | 23 | NA |
| 580 | 213.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 582 | 213.10 | humidity | 90.0 | 30 | > th | dose independent | sin | 9 | NA |
| 590 | 213.12 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 6 | 3 |
| 591 | 213.13 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 13 |
| 597 | 213.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 11 |
| 616 | 213.22 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 5 |
| 665 | 213.35 | temperature | 15.0 | 10 | > th | dose independent | rect. | 6 | 18 |
| 670 | 213.37 | temperature | 20.0 | 10 | > th | dose independent | rect. | 1 | 5 |
| 675 | 213.38 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 10 | 20 |
| 708 | 213.52 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 23 |
| 729 | 213.59 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 24 | 5 |
| 732 | 213.60 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 6 | 8 |
| 782 | 213.77 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 6 | 3 |
| 841 | 213.94 | radiation | 1.0 | 270 | > th | dose independent | sin | 23 | NA |
| 860 | 213.98 | humidity | 70.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 863 | 213.99 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 19 |
| 886 | 214.03 | humidity | 90.0 | 30 | < th | dose independent | sin | 7 | NA |
| 914 | 214.18 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 19 |
| 915 | 214.18 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 952 | 214.32 | wind | 3.0 | 270 | < th | dose independent | rect. | 23 | 4 |