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Os06g0147800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Mitogen-activated protein kinase kinase 2.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.4 (0.0235) R2 : 0.653
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.21 (0.057) R2dC : 0.345 R2C : 0.353
β3 : 1.36 (0.0711) R2dE : 0.309 R2E : 0.306
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.049 (0.0515) R2dN8 : 0.000993 R2N8 : -0.0109
σ : 0.436
deviance : 87.63
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_____
C
peak time of C : 21.6
E
wheather : temperature
threshold : 18.07
memory length : 47520
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
84.63 0.432 11.4 0.675 1.2 1.14 0.4 -0.0874 0.101 21.5 20.04 4033 -- --
84.63 0.428 11.4 0.688 1.2 1.16 0.397 -- 0.103 21.5 20.07 4016 -- --
85.21 0.43 11.4 0.661 1.2 1.15 -- -0.0655 0.0999 21.5 20.09 4026 -- --
85.21 0.43 11.4 0.666 1.21 1.14 -- -- 0.0998 21.5 20 4143 -- --
167.74 0.603 11.3 0.644 -- 1.3 -- 0.124 0.0651 -- 20 3676 -- --
107.83 0.487 11.3 1.38 1.22 -- 0.445 -- 0.413 21.7 -- -- -- --
108.57 0.488 11.3 1.37 1.22 -- -- -- 0.412 21.7 -- -- -- --
167.72 0.603 11.3 0.629 -- 1.28 -- -- 0.0709 -- 20.08 3687 -- --
87.63 0.436 11.4 -- 1.21 1.36 -- -- -0.049 21.6 18.07 47520 -- --
197.22 0.656 11.3 1.38 -- -- -- -- 0.41 -- -- -- -- --
157.88 0.588 11.3 -- 1.23 -- -- -- 0.26 21.7 -- -- -- --
170.56 0.608 11.4 -- -- 1.47 -- -- -0.0699 -- 19.4 21004 -- --
247.32 0.734 11.3 -- -- -- -- -- 0.257 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 78.50 humidity 90.0 14400 > th dose dependent rect. 5 2
3 79.72 precipitation 0.1 43200 < th dose independent rect. 1 7
4 79.72 precipitation 0.1 43200 < th dose dependent rect. 1 7
5 79.74 precipitation 0.1 43200 > th dose independent rect. 1 7
6 79.83 precipitation 0.1 43200 > th dose dependent rect. 1 7
21 80.41 radiation 40.0 4320 < th dose dependent rect. 17 1
29 80.49 wind 1.0 14400 < th dose dependent rect. 23 3
32 80.56 humidity 90.0 14400 > th dose dependent rect. 2 14
36 80.60 wind 3.0 43200 < th dose dependent rect. 22 1
39 80.63 radiation 1.0 4320 > th dose dependent rect. 17 1
41 80.65 humidity 90.0 14400 > th dose independent rect. 5 2
62 80.81 humidity 90.0 14400 > th dose dependent rect. 4 11
64 80.84 wind 7.0 43200 > th dose independent rect. 18 1
82 81.03 precipitation 0.1 43200 > th dose dependent rect. 7 1
83 81.05 precipitation 0.1 43200 > th dose independent rect. 7 1
95 81.20 humidity 80.0 14400 > th dose dependent rect. 23 2
107 81.30 humidity 90.0 14400 > th dose dependent sin 3 NA
110 81.34 humidity 60.0 43200 > th dose independent rect. 20 13
124 81.40 precipitation 0.1 43200 < th dose independent rect. 7 1
125 81.40 precipitation 0.1 43200 < th dose dependent rect. 7 1
131 81.45 humidity 60.0 43200 < th dose independent rect. 20 13
144 81.55 humidity 80.0 14400 > th dose dependent rect. 23 9
146 81.56 humidity 90.0 14400 < th dose independent rect. 23 1
156 81.60 humidity 90.0 14400 > th dose independent rect. 23 17
158 81.61 humidity 90.0 14400 < th dose independent rect. 6 1
178 81.78 wind 1.0 14400 < th dose independent rect. 23 3
180 81.79 humidity 90.0 14400 > th dose independent rect. 23 2
194 81.87 humidity 90.0 14400 < th dose independent rect. 23 17
203 81.93 humidity 70.0 43200 < th dose independent rect. 22 10
207 81.96 humidity 90.0 14400 > th dose dependent rect. 1 6
214 82.02 wind 7.0 43200 > th dose dependent rect. 16 1
217 82.03 humidity 90.0 14400 > th dose independent rect. 23 8
226 82.10 wind 7.0 43200 < th dose independent rect. 18 1
230 82.13 wind 1.0 14400 < th dose dependent rect. 23 5
241 82.21 wind 9.0 43200 < th dose independent rect. 16 1
243 82.22 radiation 40.0 4320 < th dose dependent rect. 17 3
263 82.32 humidity 70.0 43200 < th dose dependent rect. 22 10
266 82.33 radiation 40.0 4320 < th dose dependent rect. 17 5
277 82.37 humidity 70.0 43200 < th dose dependent rect. 21 12
297 82.42 radiation 30.0 4320 < th dose dependent rect. 17 11
310 82.46 humidity 90.0 14400 < th dose independent rect. 23 9
314 82.47 wind 9.0 43200 > th dose independent rect. 16 1
342 82.60 radiation 10.0 1440 < th dose independent rect. 16 1
349 82.62 radiation 10.0 1440 < th dose independent rect. 15 3
377 82.73 radiation 10.0 1440 < th dose independent rect. 15 5
379 82.75 radiation 10.0 1440 < th dose independent rect. 15 7
383 82.76 radiation 10.0 1440 < th dose independent rect. 15 10
392 82.78 humidity 50.0 14400 > th dose dependent rect. 23 2
414 82.91 atmosphere 1015.0 43200 > th dose independent rect. 19 2
462 83.09 temperature 20.0 4320 > th dose independent rect. 2 1
480 83.13 temperature 20.0 4320 < th dose independent rect. 22 2
481 83.13 wind 1.0 14400 < th dose dependent rect. 22 9
497 83.21 humidity 90.0 14400 < th dose independent rect. 22 6
502 83.23 wind 7.0 43200 > th dose dependent rect. 18 1
506 83.25 atmosphere 995.0 43200 < th dose independent rect. 21 15
509 83.26 temperature 20.0 4320 < th dose independent rect. 2 1
527 83.30 atmosphere 995.0 43200 > th dose independent rect. 22 14
528 83.30 atmosphere 995.0 43200 > th dose independent rect. 21 16
535 83.31 atmosphere 995.0 43200 > th dose independent rect. 19 18
542 83.34 temperature 20.0 4320 < th dose independent rect. 6 1
551 83.36 temperature 20.0 1440 < th dose independent rect. 22 6
557 83.38 temperature 20.0 1440 > th dose independent rect. 5 2
566 83.42 atmosphere 995.0 43200 < th dose independent rect. 23 12
581 83.46 temperature 20.0 1440 < th dose independent rect. 22 9
590 83.47 temperature 20.0 4320 > th dose independent rect. 19 9
603 83.49 atmosphere 1010.0 43200 > th dose dependent rect. 18 1
607 83.50 atmosphere 995.0 43200 > th dose independent rect. 24 11
609 83.50 temperature 20.0 14400 < th dose dependent rect. 6 1
612 83.51 radiation 1.0 14400 > th dose independent rect. 6 10
614 83.51 atmosphere 1010.0 43200 > th dose dependent rect. 11 1
617 83.52 radiation 1.0 14400 < th dose independent rect. 6 10
628 83.52 atmosphere 1010.0 43200 > th dose dependent rect. 10 10
630 83.53 atmosphere 995.0 43200 < th dose independent sin 7 NA
644 83.54 atmosphere 1010.0 43200 > th dose dependent rect. 10 7
654 83.55 temperature 20.0 4320 < th dose independent rect. 19 9
675 83.56 atmosphere 1010.0 43200 > th dose dependent rect. 13 7
680 83.56 atmosphere 1010.0 43200 > th dose dependent rect. 5 15
702 83.58 atmosphere 1010.0 43200 > th dose dependent sin 23 NA
717 83.59 wind 1.0 43200 > th dose independent rect. 18 1
724 83.59 atmosphere 1010.0 43200 > th dose dependent rect. 5 1
740 83.60 temperature 20.0 4320 > th dose independent rect. 22 6
766 83.61 atmosphere 995.0 43200 < th dose independent rect. 1 9
780 83.61 atmosphere 995.0 43200 < th dose dependent rect. 24 9
799 83.62 humidity 50.0 14400 > th dose dependent rect. 23 9
849 83.65 atmosphere 995.0 43200 < th dose independent rect. 3 6
902 83.68 atmosphere 1015.0 43200 > th dose dependent rect. 21 1
923 83.68 atmosphere 1010.0 43200 > th dose dependent rect. 5 23
925 83.69 radiation 10.0 1440 < th dose independent sin 15 NA
926 83.69 wind 1.0 43200 < th dose independent rect. 18 1
931 83.69 atmosphere 1010.0 43200 > th dose dependent no NA NA
965 83.70 temperature 20.0 1440 > th dose independent rect. 23 9
969 83.70 atmosphere 995.0 43200 < th dose dependent sin 10 NA
987 83.70 atmosphere 1010.0 43200 > th dose dependent rect. 16 22