Os06g0147600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0147600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 260.45 | 0.758 | 3.09 | -0.559 | 0.335 | 0.438 | -0.669 | -1.4 | -0.321 | 3.63 | 25.3 | 166 | -- | -- |
| 264.94 | 0.758 | 3.05 | -0.164 | 0.322 | 0.427 | -0.0545 | -- | -0.202 | 4.17 | 25.51 | 320 | -- | -- |
| 261.3 | 0.753 | 3.08 | -0.474 | 0.342 | 0.448 | -- | -1.12 | -0.306 | 3.33 | 25.4 | 164 | -- | -- |
| 264.76 | 0.758 | 3.05 | -0.177 | 0.285 | 0.449 | -- | -- | -0.208 | 4.68 | 25.5 | 401 | -- | -- |
| 264.83 | 0.758 | 3.08 | -0.447 | -- | 0.39 | -- | -1.18 | -0.284 | -- | 25.48 | 448 | -- | -- |
| 272.55 | 0.774 | 3.01 | -0.0448 | 0.114 | -- | 0.105 | -- | -0.0208 | 22.4 | -- | -- | -- | -- |
| 272.59 | 0.773 | 3.01 | -0.0494 | 0.113 | -- | -- | -- | -0.0214 | 22.8 | -- | -- | -- | -- |
| 267.34 | 0.762 | 3.04 | -0.135 | -- | 0.324 | -- | -- | -0.15 | -- | 25.5 | 480 | -- | -- |
| 265.54 | 0.759 | 3.04 | -- | 0.268 | 0.425 | -- | -- | -0.181 | 4.6 | 25.5 | 401 | -- | -- |
| 273.38 | 0.773 | 3.01 | -0.0471 | -- | -- | -- | -- | -0.0207 | -- | -- | -- | -- | -- |
| 272.65 | 0.772 | 3.01 | -- | 0.113 | -- | -- | -- | -0.0159 | 22.8 | -- | -- | -- | -- |
| 267.8 | 0.762 | 3.04 | -- | -- | 0.309 | -- | -- | -0.128 | -- | 25.5 | 479 | -- | -- |
| 273.44 | 0.772 | 3.01 | -- | -- | -- | -- | -- | -0.0155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 245.82 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 2 | 245.90 | temperature | 25.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 6 | 246.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 9 | 246.02 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 13 | 246.02 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 23 | 246.02 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 24 | 246.02 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 44 | 246.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 47 | 246.02 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 54 | 246.52 | wind | 3.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 55 | 246.54 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 57 | 246.74 | wind | 5.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 60 | 246.83 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 61 | 246.83 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 21 | 1 |
| 73 | 246.83 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 74 | 246.83 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 106 | 246.98 | wind | 7.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 109 | 246.98 | temperature | 30.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 110 | 246.98 | humidity | 50.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 113 | 246.98 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 114 | 246.98 | radiation | 1.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 119 | 246.98 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 24 | 1 |
| 120 | 246.98 | temperature | 10.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 121 | 246.98 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 126 | 246.98 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 131 | 247.15 | wind | 1.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 133 | 247.24 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 136 | 247.36 | humidity | 90.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 139 | 247.46 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 143 | 247.67 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 145 | 247.85 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 152 | 248.82 | wind | 1.0 | 90 | < th | dose dependent | rect. | 20 | 1 |
| 163 | 250.30 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 3 |
| 171 | 250.62 | wind | 1.0 | 30 | > th | dose dependent | rect. | 24 | 1 |
| 202 | 252.69 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 243 | 254.85 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 7 |
| 250 | 255.19 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 252 | 255.29 | temperature | 25.0 | 270 | > th | dose independent | rect. | 20 | 14 |
| 255 | 255.40 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 1 | 23 |
| 256 | 255.40 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 257 | 255.45 | temperature | 25.0 | 270 | > th | dose independent | sin | 10 | NA |
| 259 | 255.63 | wind | 1.0 | 90 | < th | dose independent | rect. | 20 | 1 |
| 262 | 255.63 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 11 |
| 268 | 255.78 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 274 | 255.89 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 313 | 256.98 | temperature | 25.0 | 90 | > th | dose independent | rect. | 23 | 11 |
| 318 | 257.14 | temperature | 25.0 | 270 | > th | dose dependent | sin | 11 | NA |
| 327 | 257.27 | temperature | 25.0 | 270 | < th | dose independent | sin | 10 | NA |
| 442 | 259.75 | humidity | 50.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 457 | 260.18 | temperature | 25.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 473 | 260.55 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 20 |
| 477 | 260.59 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 12 |
| 478 | 260.59 | temperature | 25.0 | 270 | > th | dose independent | rect. | 13 | 22 |
| 484 | 260.62 | temperature | 30.0 | 720 | > th | dose independent | rect. | 13 | 2 |
| 493 | 260.70 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 510 | 260.90 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 515 | 260.93 | temperature | 30.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 551 | 261.22 | temperature | 25.0 | 270 | < th | dose independent | rect. | 17 | 17 |
| 553 | 261.23 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 23 |
| 556 | 261.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 15 | 20 |
| 557 | 261.26 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 12 |
| 573 | 261.32 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 588 | 261.40 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 596 | 261.43 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 607 | 261.48 | temperature | 25.0 | 270 | > th | dose independent | rect. | 7 | 21 |
| 617 | 261.50 | temperature | 25.0 | 270 | < th | dose independent | rect. | 12 | 23 |
| 619 | 261.51 | temperature | 25.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 643 | 261.59 | temperature | 25.0 | 270 | > th | dose independent | rect. | 5 | 21 |
| 653 | 261.63 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 23 |
| 669 | 261.72 | temperature | 25.0 | 30 | > th | dose dependent | rect. | 17 | 17 |
| 675 | 261.76 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 19 | 6 |
| 685 | 261.80 | wind | 1.0 | 90 | < th | dose dependent | rect. | 2 | 1 |
| 691 | 261.82 | temperature | 25.0 | 270 | > th | dose independent | no | NA | NA |
| 718 | 261.94 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 14 |
| 834 | 262.31 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 1 |
| 858 | 262.38 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 863 | 262.40 | temperature | 30.0 | 720 | < th | dose independent | rect. | 1 | 22 |
| 873 | 262.44 | temperature | 25.0 | 270 | < th | dose independent | no | NA | NA |
| 892 | 262.51 | temperature | 25.0 | 1440 | > th | dose independent | sin | 13 | NA |
| 917 | 262.58 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 930 | 262.63 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 949 | 262.72 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 996 | 262.91 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 8 | 19 |