Os06g0146100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Disease resistance protein family protein.
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Os06g0146100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Disease resistance protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.68 | 0.599 | 7.25 | -1.31 | 0.526 | 2.21 | 1.43 | -4.3 | 0.108 | 7.75 | 8.288 | 1233 | -- | -- |
| 179.01 | 0.623 | 7.16 | -1.01 | 0.488 | 2.35 | 1.44 | -- | 0.165 | 8.04 | 8.918 | 6903 | -- | -- |
| 166.62 | 0.601 | 7.22 | -1.3 | 0.801 | 2.33 | -- | -5.01 | 0.152 | 8.12 | -24.03 | 938 | -- | -- |
| 182.64 | 0.629 | 7.15 | -0.712 | 0.535 | 2.17 | -- | -- | 0.29 | 6.76 | 2.761 | 5453 | -- | -- |
| 182.67 | 0.629 | 7.28 | -1.41 | -- | 2.19 | -- | -4.73 | 0.0677 | -- | -21.65 | 1313 | -- | -- |
| 256.4 | 0.751 | 7.05 | 0.292 | 0.547 | -- | 1.31 | -- | 0.741 | 6.84 | -- | -- | -- | -- |
| 259.8 | 0.755 | 7.05 | 0.31 | 0.571 | -- | -- | -- | 0.735 | 5.98 | -- | -- | -- | -- |
| 196.9 | 0.654 | 7.16 | -0.719 | -- | 2.18 | -- | -- | 0.283 | -- | 3.881 | 5637 | -- | -- |
| 187.56 | 0.638 | 7.11 | -- | 0.482 | 1.99 | -- | -- | 0.432 | 7.09 | 14.3 | 1331 | -- | -- |
| 276.69 | 0.777 | 7.06 | 0.326 | -- | -- | -- | -- | 0.748 | -- | -- | -- | -- | -- |
| 262.33 | 0.758 | 7.06 | -- | 0.575 | -- | -- | -- | 0.701 | 5.96 | -- | -- | -- | -- |
| 200.27 | 0.659 | 7.13 | -- | -- | 2 | -- | -- | 0.415 | -- | 13.89 | 1354 | -- | -- |
| 279.5 | 0.78 | 7.07 | -- | -- | -- | -- | -- | 0.712 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 10 | 20 |
| 11 | 159.42 | temperature | 15 | 720 | > th | dose dependent | sin | 16 | NA |
| 15 | 160.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 10 | 12 |
| 31 | 160.50 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 20 |
| 40 | 160.60 | temperature | 10 | 1440 | > th | dose dependent | sin | 21 | NA |
| 216 | 162.34 | temperature | 30 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 219 | 162.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 10 | 12 |
| 225 | 162.39 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 288 | 162.73 | temperature | 30 | 1440 | < th | dose dependent | sin | 21 | NA |
| 666 | 164.96 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 691 | 165.08 | temperature | 30 | 720 | < th | dose dependent | sin | 14 | NA |
| 724 | 165.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 14 |
| 796 | 165.71 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 830 | 165.89 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 982 | 166.82 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |