Os06g0145000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os06g0145000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.48 | 0.647 | 4.01 | -0.0262 | 1.07 | -1.61 | -0.0362 | 1.24 | -0.118 | 11.5 | 9.17 | 767 | -- | -- |
| 190.7 | 0.643 | 4.04 | -0.22 | 1.1 | -1.52 | -0.211 | -- | -0.169 | 11 | 9.317 | 913 | -- | -- |
| 189.47 | 0.641 | 4.01 | -0.0113 | 1.07 | -1.58 | -- | 1.28 | -0.116 | 11.3 | 9.792 | 829 | -- | -- |
| 190.84 | 0.643 | 4.04 | -0.251 | 1.07 | -1.55 | -- | -- | -0.179 | 11.1 | 9.857 | 874 | -- | -- |
| 250.12 | 0.737 | 4 | 0.222 | -- | -2.18 | -- | 1.46 | 0.0124 | -- | 16.51 | 842 | -- | -- |
| 223.61 | 0.701 | 4.09 | -0.662 | 1.37 | -- | -0.147 | -- | -0.426 | 10.9 | -- | -- | -- | -- |
| 223.7 | 0.7 | 4.09 | -0.668 | 1.37 | -- | -- | -- | -0.427 | 10.9 | -- | -- | -- | -- |
| 251.97 | 0.739 | 4.04 | -0.0739 | -- | -2.26 | -- | -- | -0.0672 | -- | 15.5 | 836 | -- | -- |
| 192.32 | 0.646 | 4.04 | -- | 1.05 | -1.64 | -- | -- | -0.136 | 11.1 | 9.614 | 900 | -- | -- |
| 339.82 | 0.861 | 4.12 | -0.697 | -- | -- | -- | -- | -0.436 | -- | -- | -- | -- | -- |
| 235.45 | 0.718 | 4.07 | -- | 1.37 | -- | -- | -- | -0.352 | 10.9 | -- | -- | -- | -- |
| 252.1 | 0.74 | 4.04 | -- | -- | -2.3 | -- | -- | -0.0548 | -- | 15.43 | 840 | -- | -- |
| 352.63 | 0.877 | 4.11 | -- | -- | -- | -- | -- | -0.359 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.93 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 5 | 186.43 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 6 | 186.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 7 | 186.89 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 8 | 186.89 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 9 | 186.90 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 10 | 187.14 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 16 | 21 |
| 11 | 187.16 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 14 | 187.27 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 17 | 18 |
| 16 | 187.33 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 20 | 187.51 | temperature | 20.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 52 | 188.45 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 15 | 18 |
| 71 | 188.64 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 87 | 188.84 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 19 | 13 |
| 91 | 188.87 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 14 |
| 93 | 188.88 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 109 | 188.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 114 | 188.98 | wind | 9.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 119 | 189.03 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 172 | 189.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 178 | 189.39 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 8 | 23 |
| 179 | 189.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 188 | 189.46 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 6 | 23 |
| 190 | 189.47 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 16 |
| 198 | 189.52 | temperature | 10.0 | 720 | > th | dose dependent | no | NA | NA |
| 213 | 189.54 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 214 | 189.55 | wind | 9.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 229 | 189.58 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 259 | 189.67 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 285 | 189.78 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 14 |
| 287 | 189.80 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 293 | 189.81 | wind | 9.0 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 302 | 189.84 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 326 | 189.94 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 327 | 189.94 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 334 | 189.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 335 | 189.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 1 |
| 336 | 189.96 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 342 | 190.00 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 344 | 190.01 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 360 | 190.04 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 403 | 190.13 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 17 | 5 |
| 489 | 190.32 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 13 |
| 495 | 190.34 | temperature | 25.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 505 | 190.35 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 3 | 23 |
| 676 | 190.77 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 704 | 190.82 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 18 |
| 738 | 190.88 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 786 | 190.95 | wind | 9.0 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 802 | 190.98 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 4 | 18 |
| 866 | 191.06 | wind | 7.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 867 | 191.06 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 931 | 191.14 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 980 | 191.20 | temperature | 30.0 | 1440 | < th | dose dependent | sin | 17 | NA |
| 989 | 191.21 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |