Os06g0144600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Peptidase M14, carboxypeptidase A family protein.
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Os06g0144600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Peptidase M14, carboxypeptidase A family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 66.13 | 0.382 | 7.73 | 0.0599 | 0.449 | -0.491 | -0.236 | -0.759 | 0.478 | 2.43 | 70 | 1187 | -- | -- |
| 67.28 | 0.382 | 7.73 | 0.143 | 0.446 | -0.51 | -0.436 | -- | 0.483 | 2.35 | 70 | 1180 | -- | -- |
| 66.32 | 0.379 | 7.73 | 0.053 | 0.449 | -0.488 | -- | -0.841 | 0.478 | 2.42 | 69.78 | 1187 | -- | -- |
| 67.45 | 0.383 | 7.72 | 0.169 | 0.451 | -0.546 | -- | -- | 0.47 | 2.41 | 68.25 | 1191 | -- | -- |
| 71.38 | 0.394 | 7.73 | 0.108 | -- | -0.612 | -- | -0.743 | 0.484 | -- | 68.8 | 1780 | -- | -- |
| 77.35 | 0.412 | 7.72 | 0.043 | 0.331 | -- | -0.464 | -- | 0.466 | 3.04 | -- | -- | -- | -- |
| 78.05 | 0.414 | 7.72 | 0.053 | 0.331 | -- | -- | -- | 0.469 | 3.22 | -- | -- | -- | -- |
| 71.88 | 0.395 | 7.73 | 0.157 | -- | -0.632 | -- | -- | 0.444 | -- | 67.83 | 1746 | -- | -- |
| 67.83 | 0.384 | 7.73 | -- | 0.415 | -0.507 | -- | -- | 0.453 | 2.65 | 68 | 1267 | -- | -- |
| 84.27 | 0.429 | 7.72 | 0.0671 | -- | -- | -- | -- | 0.478 | -- | -- | -- | -- | -- |
| 78.13 | 0.413 | 7.72 | -- | 0.332 | -- | -- | -- | 0.463 | 3.22 | -- | -- | -- | -- |
| 72.52 | 0.397 | 7.73 | -- | -- | -0.611 | -- | -- | 0.427 | -- | 67.76 | 1754 | -- | -- |
| 84.39 | 0.429 | 7.72 | -- | -- | -- | -- | -- | 0.47 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.08 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 2 | 58.11 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 4 | 58.34 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 7 | 58.43 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 22 | 9 |
| 16 | 58.79 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 26 | 59.06 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 50 | 59.45 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 6 |
| 51 | 59.46 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 52 | 59.47 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 6 |
| 54 | 59.51 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 77 | 59.78 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 2 |
| 94 | 60.06 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 100 | 60.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 113 | 60.24 | wind | 3.0 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 135 | 60.39 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 136 | 60.39 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 152 | 60.58 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 156 | 60.62 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 3 |
| 167 | 60.69 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 178 | 60.76 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 180 | 60.76 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 181 | 60.77 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 183 | 60.79 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 184 | 60.79 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 188 | 60.83 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 202 | 60.93 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 3 |
| 207 | 60.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 214 | 61.00 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 2 |
| 236 | 61.13 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 237 | 61.13 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 240 | 61.14 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 244 | 61.20 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 251 | 61.23 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 257 | 61.26 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 270 | 61.31 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 272 | 61.31 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 13 |
| 285 | 61.34 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 11 |
| 304 | 61.39 | wind | 9.0 | 43200 | < th | dose dependent | sin | 8 | NA |
| 305 | 61.39 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 319 | 61.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 320 | 61.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 323 | 61.44 | wind | 1.0 | 43200 | > th | dose dependent | sin | 8 | NA |
| 340 | 61.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 6 |
| 347 | 61.49 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 13 |
| 365 | 61.52 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 368 | 61.53 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 11 |
| 378 | 61.55 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 379 | 61.55 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 385 | 61.57 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 15 |
| 408 | 61.62 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 12 |
| 425 | 61.66 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 487 | 61.77 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 498 | 61.79 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 515 | 61.83 | wind | 3.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 533 | 61.87 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 541 | 61.88 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 15 | NA |
| 567 | 61.92 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 22 |
| 575 | 61.94 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 597 | 61.97 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 599 | 61.98 | wind | 3.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 606 | 61.99 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 646 | 62.05 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 655 | 62.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 20 |
| 661 | 62.07 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 676 | 62.09 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 688 | 62.10 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 19 | 5 |
| 690 | 62.10 | radiation | 20.0 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 722 | 62.14 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 803 | 62.24 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 7 |
| 834 | 62.28 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 882 | 62.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 964 | 62.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 19 |
| 971 | 62.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 992 | 62.45 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 20 |