Os06g0141800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0141800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.89 | 0.428 | 2.88 | -0.212 | 0.0837 | 0.405 | -0.254 | -1.63 | 0.0733 | 13.2 | 2.7 | 9 | -- | -- |
| 85.67 | 0.431 | 2.86 | -0.161 | 0.0855 | 0.266 | -0.211 | -- | 0.0778 | 11.5 | 4.499 | 8 | -- | -- |
| 83.12 | 0.425 | 2.88 | -0.221 | 0.0917 | 0.421 | -- | -1.5 | 0.0747 | 13.9 | 2.693 | 8 | -- | -- |
| 85.65 | 0.431 | 2.86 | -0.176 | 0.0942 | 0.292 | -- | -- | 0.0853 | 13.1 | 4 | 8 | -- | -- |
| 83.47 | 0.426 | 2.88 | -0.208 | -- | 0.368 | -- | -1.56 | 0.0739 | -- | 2.5 | 8 | -- | -- |
| 86.79 | 0.437 | 2.86 | -0.101 | 0.113 | -- | -0.362 | -- | 0.0809 | 6.91 | -- | -- | -- | -- |
| 87.13 | 0.437 | 2.86 | -0.107 | 0.112 | -- | -- | -- | 0.0818 | 6.91 | -- | -- | -- | -- |
| 86.1 | 0.432 | 2.86 | -0.167 | -- | 0.247 | -- | -- | 0.0874 | -- | 3.113 | 8 | -- | -- |
| 86.43 | 0.433 | 2.86 | -- | 0.0806 | 0.235 | -- | -- | 0.102 | 12.2 | 3.999 | 8 | -- | -- |
| 87.79 | 0.438 | 2.86 | -0.105 | -- | -- | -- | -- | 0.0839 | -- | -- | -- | -- | -- |
| 87.43 | 0.437 | 2.85 | -- | 0.111 | -- | -- | -- | 0.0938 | 6.97 | -- | -- | -- | -- |
| 86.79 | 0.434 | 2.86 | -- | -- | 0.21 | -- | -- | 0.104 | -- | 3.1 | 8 | -- | -- |
| 88.08 | 0.438 | 2.86 | -- | -- | -- | -- | -- | 0.0956 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.95 | wind | 1 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 5 | 69.36 | wind | 1 | 10 | < th | dose independent | rect. | 7 | 3 |
| 7 | 69.49 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 9 | 69.68 | humidity | 60 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 20 | 69.89 | humidity | 60 | 270 | < th | dose independent | rect. | 8 | 1 |
| 46 | 69.89 | humidity | 60 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 98 | 70.08 | humidity | 60 | 1440 | > th | dose independent | rect. | 7 | 2 |
| 99 | 70.12 | humidity | 60 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 146 | 70.27 | humidity | 60 | 10 | < th | dose independent | rect. | 17 | 18 |
| 161 | 70.42 | wind | 3 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 202 | 70.68 | humidity | 60 | 90 | < th | dose independent | rect. | 18 | 15 |
| 206 | 70.69 | humidity | 60 | 30 | < th | dose independent | rect. | 9 | 1 |
| 254 | 70.69 | humidity | 60 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 361 | 70.71 | humidity | 60 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 397 | 70.83 | wind | 1 | 10 | < th | dose independent | rect. | 9 | 1 |
| 455 | 71.16 | radiation | 40 | 30 | > th | dose dependent | rect. | 9 | 1 |
| 625 | 72.53 | wind | 1 | 10 | < th | dose independent | sin | 21 | NA |
| 649 | 72.76 | wind | 1 | 10 | < th | dose dependent | sin | 21 | NA |
| 734 | 73.10 | wind | 1 | 10 | > th | dose independent | sin | 21 | NA |
| 779 | 73.31 | radiation | 40 | 10 | > th | dose dependent | sin | 12 | NA |
| 834 | 73.91 | radiation | 40 | 10 | > th | dose independent | rect. | 9 | 1 |