Os06g0141000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Sugar transporter family protein.
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Os06g0141000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Sugar transporter family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 247.24 | 0.739 | 7.42 | 2.32 | 1.4 | -3.47 | -0.761 | -0.953 | 1.36 | 21.6 | 8.215 | 139 | -- | -- |
| 247.87 | 0.733 | 7.4 | 2.46 | 1.41 | -3.49 | -0.666 | -- | 1.4 | 21.6 | 7.337 | 144 | -- | -- |
| 249.18 | 0.735 | 7.41 | 2.4 | 1.43 | -3.5 | -- | -0.644 | 1.38 | 21.5 | 7.282 | 150 | -- | -- |
| 249.5 | 0.736 | 7.4 | 2.49 | 1.43 | -3.52 | -- | -- | 1.4 | 21.5 | 7.683 | 150 | -- | -- |
| 318.92 | 0.836 | 7.34 | 2.53 | -- | -3.59 | -- | 0.129 | 1.48 | -- | 17.4 | 7 | -- | -- |
| 371.34 | 0.903 | 7.5 | 1.74 | 1.72 | -- | -0.544 | -- | 0.911 | 23.9 | -- | -- | -- | -- |
| 372.62 | 0.904 | 7.5 | 1.76 | 1.72 | -- | -- | -- | 0.914 | 23.9 | -- | -- | -- | -- |
| 318.92 | 0.835 | 7.34 | 2.53 | -- | -3.73 | -- | -- | 1.48 | -- | 16.56 | 8 | -- | -- |
| 383.1 | 0.912 | 7.48 | -- | 1.48 | -2.06 | -- | -- | 0.967 | 22 | 23.77 | 135 | -- | -- |
| 558.75 | 1.1 | 7.46 | 1.81 | -- | -- | -- | -- | 0.937 | -- | -- | -- | -- | -- |
| 454.36 | 0.997 | 7.55 | -- | 1.74 | -- | -- | -- | 0.717 | 24 | -- | -- | -- | -- |
| 470.6 | 1.01 | 7.43 | -- | -- | -2.71 | -- | -- | 1.11 | -- | 20.37 | 2 | -- | -- |
| 645.49 | 1.19 | 7.51 | -- | -- | -- | -- | -- | 0.735 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 238.94 | temperature | 30 | 10 | < th | dose dependent | sin | 20 | NA |
| 3 | 240.83 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 6 | 242.97 | temperature | 10 | 10 | > th | dose dependent | sin | 20 | NA |
| 19 | 244.81 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 42 | 248.37 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 23 |
| 44 | 248.79 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 46 | 248.93 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 23 |
| 73 | 250.46 | temperature | 20 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 75 | 251.00 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 76 | 251.03 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 77 | 251.07 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 85 | 251.32 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 141 | 254.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 17 |
| 147 | 254.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 157 | 254.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 164 | 255.08 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 15 |
| 201 | 256.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 12 |
| 205 | 257.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 208 | 257.32 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 213 | 257.47 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 214 | 257.48 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 215 | 257.56 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 217 | 257.59 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 221 | 257.71 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 230 | 257.99 | temperature | 30 | 90 | < th | dose dependent | rect. | 6 | 15 |
| 239 | 258.46 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 247 | 258.81 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 266 | 259.33 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 285 | 259.65 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 340 | 260.90 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 377 | 261.43 | temperature | 30 | 10 | < th | dose dependent | rect. | 6 | 21 |
| 392 | 261.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 408 | 261.86 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 12 |
| 422 | 262.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 429 | 262.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 16 |
| 444 | 262.28 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 453 | 262.41 | temperature | 30 | 270 | < th | dose dependent | rect. | 3 | 19 |
| 473 | 262.70 | temperature | 20 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 502 | 263.04 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 16 |
| 508 | 263.09 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 14 |
| 520 | 263.22 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 605 | 264.15 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 626 | 264.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 787 | 265.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 797 | 266.09 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 894 | 266.79 | temperature | 20 | 10 | > th | dose dependent | rect. | 10 | 12 |
| 985 | 267.54 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 14 |