Os06g0139700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0139700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.34 | 0.207 | 10.7 | 0.861 | 0.418 | -0.401 | 0.0149 | -0.497 | 0.242 | 23.5 | 85.01 | 3595 | -- | -- |
| 19.66 | 0.206 | 10.7 | 0.867 | 0.426 | -0.444 | -0.0334 | -- | 0.248 | 23.4 | 84.06 | 3606 | -- | -- |
| 19.34 | 0.205 | 10.7 | 0.861 | 0.419 | -0.402 | -- | -0.494 | 0.241 | 23.5 | 84.9 | 3602 | -- | -- |
| 19.64 | 0.206 | 10.7 | 0.882 | 0.417 | -0.441 | -- | -- | 0.241 | 23.4 | 84 | 3591 | -- | -- |
| 28.48 | 0.249 | 10.7 | 0.866 | -- | -0.472 | -- | -0.415 | 0.27 | -- | 83 | 4505 | -- | -- |
| 22.85 | 0.224 | 10.7 | 0.875 | 0.378 | -- | -0.0469 | -- | 0.22 | 23.8 | -- | -- | -- | -- |
| 22.86 | 0.224 | 10.7 | 0.877 | 0.379 | -- | -- | -- | 0.22 | 23.8 | -- | -- | -- | -- |
| 28.47 | 0.248 | 10.7 | 0.903 | -- | -0.441 | -- | -- | 0.23 | -- | 85 | 3097 | -- | -- |
| 25.78 | 0.236 | 10.8 | -- | 0.38 | -0.897 | -- | -- | 0.0801 | 23.9 | 77.01 | 47520 | -- | -- |
| 31.88 | 0.264 | 10.7 | 0.888 | -- | -- | -- | -- | 0.225 | -- | -- | -- | -- | -- |
| 43.14 | 0.307 | 10.8 | -- | 0.389 | -- | -- | -- | 0.122 | 23.9 | -- | -- | -- | -- |
| 34.86 | 0.275 | 10.8 | -- | -- | -0.909 | -- | -- | 0.0833 | -- | 77 | 47520 | -- | -- |
| 52.69 | 0.339 | 10.8 | -- | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.03 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 5 | 18.34 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 14 | 18.59 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 15 | 18.60 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 19 | 18.63 | wind | 1.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 22 | 18.64 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 8 |
| 23 | 18.65 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 6 |
| 24 | 18.66 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 27 | 18.67 | wind | 1.0 | 43200 | > th | dose independent | rect. | 24 | 7 |
| 29 | 18.69 | wind | 1.0 | 43200 | < th | dose independent | rect. | 24 | 7 |
| 31 | 18.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 42 | 18.75 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 11 |
| 44 | 18.76 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 83 | 18.84 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 7 |
| 136 | 18.92 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 18 | 7 |
| 154 | 18.96 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 173 | 18.99 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 183 | 19.00 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 4 |
| 190 | 19.01 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 209 | 19.04 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 210 | 19.04 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 214 | 19.05 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 247 | 19.11 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 20 | 2 |
| 262 | 19.13 | wind | 3.0 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 263 | 19.13 | wind | 3.0 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 264 | 19.13 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 277 | 19.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 12 | 7 |
| 300 | 19.16 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 15 | 4 |
| 304 | 19.17 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 326 | 19.18 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 355 | 19.21 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 12 | 7 |
| 418 | 19.23 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 430 | 19.24 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 14 |
| 439 | 19.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 440 | 19.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 449 | 19.25 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 456 | 19.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 3 |
| 461 | 19.26 | humidity | 60.0 | 14400 | < th | dose independent | sin | 15 | NA |
| 464 | 19.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 3 |
| 469 | 19.26 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 523 | 19.29 | humidity | 60.0 | 14400 | > th | dose independent | sin | 15 | NA |
| 528 | 19.29 | humidity | 70.0 | 14400 | < th | dose dependent | sin | 14 | NA |
| 555 | 19.30 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 596 | 19.31 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 644 | 19.33 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 646 | 19.33 | humidity | 70.0 | 14400 | < th | dose dependent | rect. | 12 | 8 |
| 653 | 19.33 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 12 |
| 693 | 19.35 | wind | 7.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 697 | 19.35 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 706 | 19.35 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 5 |
| 789 | 19.36 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 8 | 12 |
| 803 | 19.37 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 809 | 19.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 12 |
| 811 | 19.37 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 822 | 19.37 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 7 |
| 827 | 19.37 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 10 | 10 |
| 828 | 19.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 844 | 19.38 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 848 | 19.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 849 | 19.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 12 |
| 852 | 19.38 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 16 | 20 |
| 856 | 19.38 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 858 | 19.38 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 880 | 19.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 12 |
| 905 | 19.39 | wind | 1.0 | 43200 | > th | dose dependent | sin | 7 | NA |
| 960 | 19.40 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 8 | 8 |
| 962 | 19.40 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 22 |
| 964 | 19.40 | temperature | 20.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 975 | 19.40 | temperature | 20.0 | 14400 | > th | dose dependent | rect. | 9 | 5 |