Os06g0133500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os06g0133500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 370.32 | 0.904 | 7.7 | 1.22 | 0.518 | 4.11 | -0.334 | 5.18 | 0.285 | 11.8 | 5.656 | 277 | -- | -- |
| 374.85 | 0.902 | 7.65 | 1.25 | 0.571 | 3.26 | -0.251 | -- | 0.315 | 12.2 | 5.784 | 352 | -- | -- |
| 370.78 | 0.897 | 7.7 | 1.21 | 0.516 | 4.12 | -- | 5.12 | 0.284 | 11.9 | 5.663 | 276 | -- | -- |
| 374.56 | 0.901 | 7.65 | 1.11 | 0.577 | 3.05 | -- | -- | 0.307 | 12.3 | 5.722 | 358 | -- | -- |
| 385.25 | 0.914 | 7.7 | 1.2 | -- | 3.76 | -- | 4.05 | 0.272 | -- | 5.356 | 201 | -- | -- |
| 425.05 | 0.967 | 7.68 | 0.713 | 0.685 | -- | -0.496 | -- | 0.216 | 14.2 | -- | -- | -- | -- |
| 425.97 | 0.967 | 7.68 | 0.699 | 0.684 | -- | -- | -- | 0.213 | 14.2 | -- | -- | -- | -- |
| 389.84 | 0.92 | 7.68 | 1.11 | -- | 2.83 | -- | -- | 0.315 | -- | 5.236 | 196 | -- | -- |
| 404.23 | 0.936 | 7.68 | -- | 0.57 | 2.47 | -- | -- | 0.18 | 12.8 | 5.938 | 357 | -- | -- |
| 453.92 | 0.996 | 7.69 | 0.671 | -- | -- | -- | -- | 0.196 | -- | -- | -- | -- | -- |
| 438.85 | 0.98 | 7.7 | -- | 0.671 | -- | -- | -- | 0.135 | 14.2 | -- | -- | -- | -- |
| 416.1 | 0.95 | 7.7 | -- | -- | 1.79 | -- | -- | 0.148 | -- | 4.011 | 151 | -- | -- |
| 465.78 | 1.01 | 7.7 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 358.56 | wind | 7 | 90 | > th | dose dependent | sin | 12 | NA |
| 5 | 362.04 | wind | 7 | 90 | < th | dose independent | sin | 13 | NA |
| 6 | 362.34 | wind | 7 | 90 | > th | dose independent | sin | 12 | NA |
| 17 | 364.68 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 11 |
| 18 | 364.77 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 15 |
| 27 | 365.70 | wind | 7 | 90 | > th | dose dependent | rect. | 17 | 15 |
| 28 | 365.80 | wind | 7 | 90 | > th | dose dependent | rect. | 17 | 12 |
| 42 | 367.60 | wind | 7 | 270 | > th | dose independent | rect. | 13 | 22 |
| 59 | 369.06 | wind | 7 | 90 | > th | dose independent | rect. | 17 | 7 |
| 67 | 369.35 | wind | 7 | 10 | > th | dose dependent | sin | 11 | NA |
| 69 | 369.42 | wind | 5 | 270 | > th | dose dependent | rect. | 13 | 22 |
| 88 | 370.58 | wind | 5 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 144 | 371.67 | wind | 5 | 90 | > th | dose dependent | rect. | 11 | 17 |
| 148 | 371.73 | wind | 5 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 150 | 371.76 | wind | 7 | 90 | > th | dose dependent | rect. | 15 | 14 |
| 165 | 371.87 | wind | 7 | 90 | > th | dose dependent | rect. | 13 | 19 |
| 169 | 371.92 | wind | 7 | 90 | > th | dose dependent | rect. | 13 | 16 |
| 174 | 371.93 | wind | 5 | 270 | > th | dose dependent | no | NA | NA |
| 197 | 372.28 | wind | 7 | 270 | > th | dose independent | rect. | 11 | 15 |
| 221 | 372.49 | wind | 5 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 266 | 372.95 | wind | 5 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 267 | 372.96 | wind | 7 | 270 | > th | dose independent | rect. | 7 | 19 |
| 302 | 373.26 | wind | 7 | 270 | > th | dose independent | no | NA | NA |
| 314 | 373.40 | wind | 7 | 270 | > th | dose independent | rect. | 24 | 23 |
| 317 | 373.43 | wind | 7 | 270 | > th | dose independent | rect. | 13 | 13 |
| 325 | 373.54 | wind | 7 | 270 | < th | dose independent | no | NA | NA |
| 341 | 373.65 | wind | 7 | 270 | > th | dose independent | rect. | 19 | 23 |
| 384 | 374.06 | wind | 5 | 270 | > th | dose dependent | rect. | 21 | 23 |
| 500 | 375.28 | wind | 7 | 270 | > th | dose independent | rect. | 21 | 23 |
| 590 | 376.13 | wind | 9 | 720 | > th | dose dependent | rect. | 10 | 7 |
| 604 | 376.25 | wind | 9 | 720 | > th | dose dependent | rect. | 20 | 21 |
| 632 | 376.53 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 667 | 376.67 | wind | 9 | 720 | > th | dose independent | rect. | 20 | 21 |
| 717 | 376.98 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 724 | 377.05 | wind | 9 | 720 | > th | dose independent | rect. | 10 | 7 |
| 793 | 377.38 | wind | 7 | 10 | > th | dose independent | rect. | 17 | 12 |
| 951 | 378.51 | wind | 9 | 720 | < th | dose independent | sin | 0 | NA |