Os06g0132400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Magnesium-protoporphyrin O-methyltransferase (EC 2.1.1.11) (Magnesium- protoporphyrin IX methyltransferase).
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Os06g0132400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Magnesium-protoporphyrin O-methyltransferase (EC 2.1.1.11) (Magnesium- protoporphyrin IX methyltransferase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 146.15 | 0.568 | 13 | 0.175 | 1.63 | -0.357 | -0.701 | -3.56 | -0.938 | 17 | 0.1687 | 5342 | -- | -- |
| 143.66 | 0.558 | 13 | 0.162 | 1.56 | -1 | -0.964 | -- | -1.09 | 16.9 | 0.4227 | 16969 | -- | -- |
| 147.39 | 0.565 | 13 | 0.163 | 1.63 | -0.333 | -- | -3.54 | -0.935 | 17 | 0.1754 | 5341 | -- | -- |
| 142.11 | 0.555 | 13 | 0.237 | 1.68 | -1.19 | -- | -- | -1.04 | 16.9 | 0.4177 | 17248 | -- | -- |
| 286.06 | 0.788 | 13 | 0.147 | -- | -0.313 | -- | -3.9 | -0.957 | -- | 0.1012 | 5379 | -- | -- |
| 174.17 | 0.619 | 12.9 | -0.126 | 1.65 | -- | -0.509 | -- | -0.88 | 16.9 | -- | -- | -- | -- |
| 174.83 | 0.619 | 12.9 | -0.127 | 1.65 | -- | -- | -- | -0.882 | 17 | -- | -- | -- | -- |
| 286.27 | 0.788 | 13 | 0.186 | -- | -1.2 | -- | -- | -1.1 | -- | 0.4268 | 16648 | -- | -- |
| 142.8 | 0.557 | 13 | -- | 1.68 | -1.12 | -- | -- | -1.06 | 16.9 | 0.374 | 16835 | -- | -- |
| 317.92 | 0.833 | 12.9 | -0.187 | -- | -- | -- | -- | -0.924 | -- | -- | -- | -- | -- |
| 175.25 | 0.619 | 12.9 | -- | 1.65 | -- | -- | -- | -0.868 | 17 | -- | -- | -- | -- |
| 286.69 | 0.789 | 13 | -- | -- | -1.2 | -- | -- | -1.12 | -- | 0.3958 | 16644 | -- | -- |
| 318.85 | 0.833 | 12.9 | -- | -- | -- | -- | -- | -0.904 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 131.51 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 6 | 11 |
| 2 | 131.61 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 3 | 131.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 11 |
| 4 | 131.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 11 |
| 12 | 133.02 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 20 | 133.34 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 29 | 133.55 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 30 | 133.67 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 31 | 133.67 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 40 | 134.03 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 2 |
| 47 | 134.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 2 |
| 56 | 134.31 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 2 | NA |
| 73 | 134.59 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 2 |
| 99 | 135.15 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 108 | 135.31 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 109 | 135.31 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 112 | 135.38 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 119 | 135.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 130 | 135.84 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 152 | 136.09 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 154 | 136.11 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 165 | 136.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 166 | 136.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 168 | 136.22 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 170 | 136.30 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 178 | 136.41 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 180 | 136.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 189 | 136.53 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 194 | 136.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 196 | 136.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 198 | 136.58 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 199 | 136.58 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 202 | 136.63 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 204 | 136.63 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 210 | 136.70 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 3 |
| 216 | 136.75 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 22 | 9 |
| 221 | 136.80 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 222 | 136.80 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 16 | 4 |
| 316 | 137.56 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 4 |
| 331 | 137.68 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 343 | 137.85 | wind | 1.0 | 43200 | < th | dose independent | rect. | 21 | 9 |
| 377 | 138.17 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 11 |
| 379 | 138.20 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 6 |
| 420 | 138.53 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 4 | 6 |
| 445 | 138.69 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 15 |
| 448 | 138.71 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 452 | 138.74 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 459 | 138.83 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 7 |
| 482 | 139.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 483 | 139.05 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 22 | 10 |
| 488 | 139.10 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 509 | 139.23 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 7 |
| 524 | 139.35 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 526 | 139.35 | wind | 1.0 | 43200 | > th | dose independent | rect. | 22 | 9 |
| 530 | 139.37 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 562 | 139.48 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 10 |
| 574 | 139.60 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 4 | 6 |
| 577 | 139.60 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 596 | 139.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 7 |
| 605 | 139.77 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 621 | 139.83 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 633 | 139.91 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 8 |
| 634 | 139.91 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 647 | 139.96 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 650 | 139.98 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 2 |
| 665 | 140.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 16 | 1 |
| 700 | 140.17 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 732 | 140.29 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 7 |
| 737 | 140.32 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 741 | 140.34 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 747 | 140.36 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 12 | 10 |
| 749 | 140.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 754 | 140.37 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 762 | 140.40 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 807 | 140.53 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 12 | 10 |
| 816 | 140.54 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 848 | 140.61 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 2 |
| 856 | 140.63 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 889 | 140.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 891 | 140.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 900 | 140.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 15 |
| 904 | 140.74 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 907 | 140.75 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 3 |
| 914 | 140.78 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 915 | 140.79 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 13 |
| 921 | 140.83 | wind | 1.0 | 43200 | < th | dose dependent | sin | 9 | NA |
| 952 | 140.90 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 975 | 140.96 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 3 |
| 976 | 140.96 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 7 |
| 982 | 140.98 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |