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Os06g0132300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.2 (0.0191) R2 : 0.162
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.376 (0.0401) R2dN8 : 0.209 R2N8 : 0.162
σ : 0.359
deviance : 59.11
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
42.03 0.305 12.2 -0.471 0.16 0.725 0.769 -0.857 -0.516 9.68 23.8 28 -- --
42.37 0.303 12.2 -0.369 0.143 0.705 0.787 -- -0.49 8.93 23.6 26 -- --
43.02 0.305 12.2 -0.318 0.221 0.527 -- -0.0221 -0.473 12.9 23.1 18 -- --
43.01 0.305 12.2 -0.303 0.23 0.505 -- -- -0.468 13 23.1 12 -- --
45.42 0.314 12.2 -0.38 -- 0.683 -- -0.107 -0.494 -- 23.1 14 -- --
46.75 0.321 12.2 -0.218 0.418 -- 0.274 -- -0.394 13.6 -- -- -- --
47.01 0.321 12.2 -0.208 0.421 -- -- -- -0.391 13.8 -- -- -- --
45.38 0.314 12.2 -0.348 -- 0.705 -- -- -0.499 -- 23.1 12 -- --
45.29 0.313 12.2 -- 0.268 0.421 -- -- -0.424 13.1 23.39 19 -- --
57.77 0.355 12.2 -0.226 -- -- -- -- -0.401 -- -- -- -- --
48.15 0.325 12.2 -- 0.425 -- -- -- -0.368 13.8 -- -- -- --
48.39 0.324 12.2 -- -- 0.647 -- -- -0.444 -- 23.76 12 -- --
59.11 0.359 12.2 -- -- -- -- -- -0.376 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 37.54 temperature 15 30 > th dose dependent rect. 23 19
2 37.69 temperature 20 270 > th dose dependent rect. 2 14
5 37.84 temperature 10 270 > th dose dependent rect. 21 19
7 37.87 atmosphere 1000 270 > th dose independent rect. 16 11
17 38.18 temperature 20 30 > th dose dependent rect. 4 14
33 38.39 temperature 20 30 > th dose dependent rect. 1 17
58 38.70 atmosphere 995 270 > th dose dependent rect. 16 5
74 38.90 temperature 25 30 > th dose independent rect. 1 17
105 39.12 temperature 25 30 > th dose independent rect. 23 19
113 39.16 temperature 25 270 > th dose independent rect. 1 15
129 39.24 temperature 30 720 < th dose independent rect. 15 13
130 39.24 atmosphere 1000 30 > th dose independent rect. 18 18
137 39.29 atmosphere 1000 270 > th dose independent rect. 17 17
141 39.32 atmosphere 1000 270 > th dose independent rect. 16 20
146 39.33 temperature 10 270 > th dose dependent rect. 21 10
159 39.38 atmosphere 1000 270 > th dose independent rect. 17 4
160 39.38 temperature 30 720 < th dose independent rect. 15 5
166 39.41 temperature 30 10 < th dose dependent rect. 16 16
192 39.53 humidity 70 270 > th dose independent rect. 17 3
193 39.53 temperature 20 270 > th dose dependent rect. 10 6
223 39.66 temperature 20 30 > th dose independent rect. 20 16
228 39.67 atmosphere 1000 270 > th dose independent rect. 16 6
240 39.69 temperature 30 720 < th dose dependent rect. 17 2
241 39.69 temperature 15 30 > th dose dependent rect. 12 6
247 39.70 temperature 30 720 < th dose dependent rect. 15 6
274 39.79 temperature 30 720 < th dose dependent rect. 9 12
304 39.86 temperature 20 270 > th dose dependent sin 2 NA
333 39.90 temperature 10 720 > th dose dependent rect. 4 3
347 39.93 atmosphere 995 720 > th dose independent rect. 7 14
348 39.93 temperature 10 10 > th dose dependent rect. 21 23
350 39.94 atmosphere 995 720 > th dose independent rect. 9 10
353 39.95 temperature 15 90 > th dose independent rect. 18 18
359 39.96 atmosphere 1015 270 < th dose dependent rect. 11 6
360 39.96 atmosphere 1015 30 < th dose dependent rect. 12 6
364 39.98 humidity 50 14400 > th dose independent rect. 19 10
366 39.98 atmosphere 995 720 > th dose independent rect. 9 18
376 39.99 temperature 10 720 > th dose dependent rect. 3 5
391 40.02 temperature 25 270 > th dose independent rect. 10 6
411 40.06 temperature 25 30 > th dose independent rect. 12 6
412 40.06 humidity 60 720 > th dose independent rect. 14 6
417 40.07 temperature 20 270 > th dose independent rect. 21 19
419 40.07 temperature 30 720 < th dose dependent sin 20 NA
422 40.07 atmosphere 995 30 > th dose dependent rect. 18 10
440 40.11 temperature 15 270 > th dose independent rect. 16 20
454 40.13 atmosphere 1010 10 < th dose dependent rect. 12 12
460 40.14 atmosphere 1015 10 < th dose dependent rect. 12 8
469 40.16 radiation 1 30 < th dose independent sin 16 NA
485 40.18 temperature 30 720 < th dose independent sin 18 NA
488 40.18 humidity 60 720 > th dose independent rect. 14 14
490 40.18 temperature 30 720 < th dose dependent rect. 24 4
506 40.20 radiation 1 10 < th dose dependent sin 16 NA
514 40.21 radiation 10 720 < th dose independent rect. 15 4
574 40.28 temperature 30 720 < th dose independent rect. 10 15
595 40.32 temperature 30 720 < th dose independent rect. 8 12
605 40.33 temperature 30 720 < th dose independent rect. 1 18
654 40.39 atmosphere 1010 90 < th dose dependent rect. 13 10
671 40.41 wind 3 1440 < th dose dependent rect. 5 2
672 40.41 radiation 10 720 < th dose dependent rect. 16 3
683 40.42 temperature 30 90 < th dose dependent rect. 16 7
716 40.45 atmosphere 1005 10 > th dose dependent rect. 17 6
737 40.47 temperature 15 30 > th dose dependent rect. 12 8
761 40.49 atmosphere 995 720 > th dose independent rect. 7 21
767 40.50 humidity 70 720 > th dose independent rect. 17 11
768 40.50 humidity 60 720 > th dose independent rect. 11 17
775 40.51 temperature 20 270 > th dose independent rect. 20 8
780 40.51 temperature 30 720 < th dose independent rect. 3 22
782 40.51 temperature 30 30 < th dose dependent sin 13 NA
789 40.52 humidity 60 720 > th dose independent rect. 9 11
818 40.54 temperature 30 720 < th dose independent rect. 1 22
833 40.55 atmosphere 1000 270 > th dose independent rect. 16 14
843 40.56 radiation 1 90 < th dose independent rect. 17 6
844 40.56 temperature 30 720 < th dose independent rect. 23 16
849 40.56 humidity 50 90 > th dose dependent rect. 17 6
860 40.57 temperature 30 270 < th dose independent rect. 16 18
885 40.59 temperature 20 30 > th dose independent rect. 20 8
898 40.60 temperature 30 720 < th dose independent rect. 16 20
900 40.60 atmosphere 995 10 > th dose dependent sin 16 NA
923 40.62 radiation 10 720 < th dose independent rect. 16 11
940 40.63 radiation 10 90 < th dose dependent rect. 17 6
954 40.64 wind 9 43200 > th dose dependent rect. 18 14
968 40.66 wind 1 1440 < th dose independent rect. 3 4
975 40.66 radiation 1 90 < th dose independent rect. 10 13
981 40.66 humidity 60 720 > th dose independent rect. 9 18
988 40.66 atmosphere 995 720 > th dose dependent rect. 9 11