Os06g0131100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : WD40-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
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Os06g0131100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : WD40-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 64.52 | 0.377 | 10.1 | -0.731 | 2.04 | -2.14 | 0.066 | 0.475 | -0.0833 | 10.2 | 29.5 | 10 | 21.8 | -- |
| 64.83 | 0.375 | 10.1 | -0.691 | 2.04 | -2.17 | 0.21 | -- | -0.0716 | 10.2 | 29.48 | 10 | 21.8 | -- |
| 64.5 | 0.377 | 10.1 | -0.73 | 2.03 | -2.12 | -- | 0.546 | -0.0777 | 10.2 | 29.5 | 10 | 21.8 | -- |
| 65 | 0.375 | 10.1 | -0.683 | 2.05 | -2.19 | -- | -- | -0.0731 | 10.2 | 29.46 | 10 | 21.7 | -- |
| 110.88 | 0.49 | 10.1 | -0.436 | -- | -2.25 | -- | -1.06 | 0.155 | -- | 51.26 | 58 | 6.56 | -- |
| 111.7 | 0.495 | 10.1 | -0.36 | 1.73 | -- | 0.603 | -- | 0.234 | 12.1 | -- | -- | -- | -- |
| 113.27 | 0.498 | 10.1 | -0.336 | 1.73 | -- | -- | -- | 0.237 | 12.1 | -- | -- | -- | -- |
| 111.42 | 0.492 | 10.1 | -0.372 | -- | -2.01 | -- | -- | 0.182 | -- | 72.31 | 5 | 6.05 | -- |
| 76.25 | 0.409 | 10.1 | -- | 2 | -1.94 | -- | -- | 0.0434 | 10.5 | 29.5 | 11 | 21.6 | -- |
| 302.25 | 0.812 | 10.1 | -0.39 | -- | -- | -- | -- | 0.212 | -- | -- | -- | -- | -- |
| 116.24 | 0.504 | 10.1 | -- | 1.74 | -- | -- | -- | 0.274 | 12.1 | -- | -- | -- | -- |
| 115.25 | 0.5 | 10.1 | -- | -- | -1.94 | -- | -- | 0.241 | -- | 93.73 | 4 | 5.99 | -- |
| 306.27 | 0.817 | 10.1 | -- | -- | -- | -- | -- | 0.255 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 64.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 2 | 15 |
| 2 | 64.18 | temperature | 10 | 90 | > th | dose dependent | rect. | 6 | 20 |
| 3 | 64.34 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 5 | 64.80 | temperature | 30 | 10 | < th | dose dependent | sin | 4 | NA |
| 8 | 65.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 15 |
| 14 | 65.36 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 21 |
| 21 | 65.71 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 15 |
| 26 | 65.83 | temperature | 30 | 90 | < th | dose dependent | rect. | 2 | 17 |
| 51 | 67.13 | temperature | 10 | 10 | > th | dose dependent | sin | 4 | NA |
| 53 | 67.17 | temperature | 15 | 90 | > th | dose dependent | rect. | 20 | 17 |
| 61 | 67.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 6 |
| 94 | 68.85 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 16 |
| 102 | 69.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 20 | 18 |
| 178 | 71.35 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 6 |
| 216 | 72.30 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 224 | 72.49 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 5 |
| 252 | 73.29 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 20 |
| 257 | 73.49 | radiation | 1 | 270 | < th | dose dependent | sin | 5 | NA |
| 266 | 73.64 | temperature | 20 | 270 | > th | dose independent | rect. | 5 | 19 |
| 408 | 75.84 | radiation | 1 | 270 | < th | dose independent | sin | 6 | NA |
| 414 | 75.90 | radiation | 1 | 270 | > th | dose independent | sin | 5 | NA |
| 455 | 76.46 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 7 |
| 468 | 76.71 | temperature | 25 | 10 | > th | dose independent | rect. | 7 | 5 |
| 568 | 77.99 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 17 |
| 569 | 78.00 | temperature | 25 | 90 | < th | dose independent | rect. | 2 | 15 |
| 586 | 78.18 | radiation | 1 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 624 | 78.48 | radiation | 1 | 270 | < th | dose independent | rect. | 23 | 17 |
| 649 | 78.67 | radiation | 1 | 270 | < th | dose dependent | rect. | 23 | 17 |
| 685 | 78.92 | temperature | 25 | 90 | > th | dose independent | rect. | 20 | 17 |
| 748 | 79.42 | radiation | 1 | 270 | < th | dose independent | rect. | 1 | 15 |
| 830 | 80.01 | radiation | 1 | 270 | > th | dose independent | rect. | 5 | 6 |
| 847 | 80.13 | radiation | 1 | 270 | < th | dose dependent | rect. | 22 | 21 |
| 874 | 80.23 | atmosphere | 1010 | 90 | < th | dose independent | rect. | 7 | 19 |
| 913 | 80.52 | wind | 9 | 270 | < th | dose dependent | rect. | 6 | 5 |
| 970 | 80.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 972 | 80.98 | radiation | 1 | 270 | < th | dose independent | rect. | 22 | 21 |
| 986 | 81.07 | humidity | 80 | 30 | > th | dose independent | rect. | 2 | 14 |