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Os06g0129900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Cytochrome P450 CYPD.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.4 (0.0306) R2 : 0.539
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.19 (0.0714) R2dC : 0.283 R2C : 0.309
β3 : 1.45 (0.116) R2dE : 0.191 R2E : 0.248
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.166 (0.0689) R2dN8 : 0.00908 R2N8 : 0.0367
σ : 0.561
deviance : 145.34
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_____
C
peak time of C : 23.5
E
wheather : temperature
threshold : -6.118
memory length : 9202
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
133.02 0.542 12.4 -0.348 1.16 1.21 0.0187 -3.99 0.156 23.7 4.605 2004 -- --
143.85 0.559 12.3 0.318 1.21 1.27 -0.163 -- 0.281 23.4 -8.957 7463 -- --
133.02 0.537 12.4 -0.347 1.16 1.21 -- -3.99 0.156 23.7 4.529 1998 -- --
143.96 0.559 12.3 0.321 1.21 1.27 -- -- 0.281 23.5 -7.666 7467 -- --
191.54 0.645 12.4 -0.238 -- 2.04 -- -3.5 0.122 -- -2.025 895 -- --
170.58 0.612 12.3 0.962 1.23 -- -0.105 -- 0.624 23.5 -- -- -- --
170.63 0.612 12.3 0.966 1.24 -- -- -- 0.624 23.5 -- -- -- --
201.65 0.661 12.3 0.452 -- 2.02 -- -- 0.317 -- 10.1 882 -- --
145.34 0.561 12.4 -- 1.19 1.45 -- -- 0.166 23.5 -6.118 9202 -- --
266.37 0.763 12.2 1 -- -- -- -- 0.637 -- -- -- -- --
195.24 0.654 12.3 -- 1.25 -- -- -- 0.516 23.5 -- -- -- --
206.42 0.669 12.3 -- -- 2.19 -- -- 0.243 -- 11.68 893 -- --
292.73 0.799 12.3 -- -- -- -- -- 0.527 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 126.91 atmosphere 1000 43200 < th dose dependent rect. 14 1
2 127.23 atmosphere 995 43200 > th dose independent rect. 13 9
4 127.83 atmosphere 995 43200 > th dose independent rect. 12 11
7 127.91 wind 1 43200 < th dose dependent rect. 5 21
8 128.01 radiation 1 720 < th dose independent rect. 10 2
9 128.01 radiation 1 720 < th dose dependent rect. 10 2
11 128.11 atmosphere 995 43200 < th dose independent rect. 12 11
13 128.25 atmosphere 995 43200 < th dose independent rect. 13 9
29 129.55 atmosphere 995 43200 > th dose independent sin 19 NA
35 129.83 atmosphere 995 43200 < th dose dependent rect. 15 7
38 129.93 wind 3 43200 < th dose independent rect. 20 4
44 130.11 wind 3 43200 > th dose independent rect. 20 4
45 130.12 atmosphere 995 43200 < th dose independent sin 19 NA
49 130.37 radiation 30 4320 < th dose independent rect. 20 12
55 130.46 radiation 30 4320 < th dose independent rect. 23 9
61 130.52 radiation 30 4320 < th dose independent rect. 3 5
62 130.55 radiation 30 4320 < th dose independent rect. 1 7
63 130.57 humidity 80 43200 < th dose dependent rect. 21 4
74 130.79 humidity 80 43200 < th dose dependent rect. 23 1
89 131.02 wind 3 43200 > th dose independent rect. 20 7
101 131.36 wind 3 43200 < th dose dependent rect. 6 3
116 131.57 humidity 80 43200 < th dose dependent rect. 20 11
125 131.63 wind 3 43200 < th dose independent rect. 20 7
128 131.72 humidity 90 14400 > th dose independent rect. 18 1
140 131.84 humidity 90 14400 > th dose dependent rect. 20 3
144 131.94 atmosphere 995 43200 < th dose independent rect. 14 3
145 131.94 wind 5 43200 < th dose dependent rect. 20 4
146 131.95 atmosphere 995 43200 > th dose independent rect. 14 3
147 131.96 atmosphere 995 43200 > th dose independent rect. 15 1
150 132.00 wind 5 43200 < th dose dependent rect. 20 6
154 132.05 humidity 90 14400 > th dose dependent rect. 18 5
155 132.06 atmosphere 995 43200 < th dose independent rect. 15 1
164 132.21 radiation 1 270 < th dose independent rect. 10 5
167 132.21 radiation 1 270 < th dose dependent rect. 10 5
172 132.24 wind 3 43200 < th dose dependent rect. 5 7
177 132.26 atmosphere 995 43200 > th dose independent rect. 13 6
215 132.57 wind 3 43200 < th dose dependent rect. 5 9
219 132.62 atmosphere 995 43200 < th dose independent rect. 13 6
235 132.71 temperature 10 1440 > th dose dependent rect. 18 7
243 132.75 wind 3 43200 > th dose independent rect. 19 20
246 132.77 atmosphere 995 43200 > th dose independent rect. 5 18
247 132.77 temperature 10 1440 > th dose dependent rect. 17 9
255 132.82 temperature 30 1440 < th dose dependent rect. 18 7
259 132.84 atmosphere 995 43200 > th dose independent rect. 3 16
265 132.86 wind 3 43200 < th dose independent rect. 19 20
268 132.87 wind 1 43200 > th dose dependent rect. 20 5
282 132.93 wind 3 43200 > th dose independent rect. 19 12
360 133.24 wind 3 43200 < th dose independent rect. 19 12
363 133.25 radiation 30 4320 > th dose independent rect. 7 1
378 133.25 temperature 10 1440 > th dose dependent rect. 21 2
379 133.25 temperature 30 1440 < th dose dependent rect. 21 3
405 133.34 humidity 80 43200 > th dose independent rect. 21 5
408 133.34 temperature 10 1440 > th dose dependent rect. 17 16
414 133.37 humidity 80 43200 < th dose independent rect. 1 1
429 133.40 temperature 10 1440 > th dose dependent rect. 17 18
430 133.41 humidity 90 14400 < th dose independent rect. 18 1
470 133.51 temperature 30 1440 < th dose dependent rect. 17 16
486 133.56 wind 3 43200 > th dose independent rect. 6 1
488 133.56 temperature 10 1440 > th dose dependent sin 13 NA
498 133.58 wind 3 43200 > th dose independent sin 12 NA
499 133.58 humidity 90 14400 > th dose dependent sin 17 NA
527 133.65 atmosphere 995 43200 < th dose independent rect. 3 16
549 133.68 humidity 80 43200 < th dose independent rect. 21 5
629 133.82 wind 9 43200 < th dose dependent rect. 6 1
631 133.83 humidity 80 43200 > th dose independent rect. 24 1
643 133.85 temperature 30 1440 < th dose dependent sin 12 NA
693 133.94 wind 3 43200 < th dose independent rect. 19 15
704 133.96 wind 3 43200 < th dose independent sin 12 NA
717 133.98 humidity 80 43200 < th dose independent rect. 21 9
775 134.08 wind 1 43200 > th dose dependent rect. 6 1
809 134.15 wind 9 43200 > th dose independent rect. 2 12
819 134.17 humidity 80 43200 < th dose independent rect. 23 7
823 134.17 humidity 90 14400 > th dose dependent rect. 3 20
832 134.20 wind 3 43200 < th dose independent rect. 6 1
873 134.25 humidity 90 14400 > th dose independent rect. 18 4
921 134.31 wind 5 43200 < th dose dependent rect. 19 21
962 134.37 wind 9 43200 > th dose dependent rect. 13 19
968 134.38 wind 3 43200 > th dose independent rect. 13 23
979 134.40 humidity 90 14400 < th dose independent rect. 20 1
986 134.41 wind 3 43200 > th dose independent rect. 1 23