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Os06g0129800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0202) R2 : 0.0469
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.202 (0.0426) R2dN8 : 0.0606 R2N8 : 0.0469
σ : 0.381
deviance : 66.52
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.98 0.312 10.1 -0.113 0.542 -0.399 0.462 0.679 -0.0892 17.9 10.3 1298 -- --
44.96 0.312 10.1 -0.115 0.544 -0.396 0.433 -- -0.091 17.9 10 1310 -- --
44.49 0.311 10.1 -0.111 0.541 -0.402 -- 0.744 -0.0843 18 10.2 1286 -- --
45.34 0.314 10.1 -0.187 0.545 -0.412 -- -- -0.119 18 10 1316 -- --
59.11 0.358 10.1 -0.0977 -- -0.354 -- 0.706 -0.0839 -- 20.02 1310 -- --
48.32 0.326 10.2 -0.319 0.526 -- 0.493 -- -0.228 17.4 -- -- -- --
48.92 0.328 10.2 -0.32 0.529 -- -- -- -0.226 17.4 -- -- -- --
59.24 0.358 10.1 -0.27 -- -0.334 -- -- -0.123 -- 50.51 1334 -- --
46.46 0.317 10.1 -- 0.545 -0.41 -- -- -0.118 18 10.01 1317 -- --
63.51 0.372 10.2 -0.338 -- -- -- -- -0.239 -- -- -- -- --
51.62 0.336 10.2 -- 0.534 -- -- -- -0.19 17.3 -- -- -- --
60.77 0.363 10.1 -- -- -0.417 -- -- -0.121 -- 10.01 1398 -- --
66.52 0.381 10.1 -- -- -- -- -- -0.202 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 38.82 atmosphere 1000.0 90 > th dose dependent rect. 3 5
3 39.07 atmosphere 1000.0 10 > th dose dependent rect. 3 6
8 39.62 atmosphere 1005.0 90 > th dose independent rect. 3 5
11 39.76 wind 5.0 90 < th dose independent rect. 3 5
13 39.81 atmosphere 1000.0 270 > th dose dependent rect. 3 2
15 39.89 atmosphere 1005.0 270 > th dose independent rect. 3 3
17 39.93 atmosphere 1005.0 10 > th dose independent rect. 4 5
22 40.03 wind 5.0 270 < th dose independent rect. 3 2
24 40.04 temperature 15.0 10 > th dose independent rect. 15 18
30 40.11 radiation 1.0 90 > th dose independent rect. 15 17
41 40.23 temperature 10.0 10 > th dose dependent rect. 15 18
47 40.35 wind 9.0 90 < th dose dependent rect. 3 5
49 40.36 wind 5.0 10 < th dose independent rect. 3 6
51 40.37 precipitation 0.1 90 < th dose independent rect. 3 5
52 40.37 precipitation 0.1 90 < th dose dependent rect. 3 5
53 40.38 precipitation 0.1 10 < th dose independent rect. 15 18
54 40.38 precipitation 0.1 10 < th dose dependent rect. 15 18
59 40.42 humidity 90.0 10 < th dose independent rect. 3 6
67 40.46 radiation 40.0 90 < th dose independent rect. 13 19
71 40.49 wind 1.0 30 > th dose independent rect. 9 6
72 40.49 radiation 1.0 10 > th dose independent rect. 9 6
75 40.51 wind 9.0 10 < th dose dependent rect. 4 5
77 40.52 temperature 10.0 10 > th dose independent rect. 9 6
79 40.52 atmosphere 995.0 10 > th dose independent rect. 9 6
80 40.52 atmosphere 1015.0 10 < th dose independent rect. 9 6
81 40.52 precipitation 0.1 10 < th dose independent rect. 9 6
84 40.52 precipitation 0.1 10 < th dose dependent rect. 9 6
90 40.56 precipitation 0.1 270 < th dose independent rect. 3 2
91 40.56 precipitation 0.1 90 < th dose independent rect. 8 19
92 40.56 precipitation 0.1 270 < th dose dependent rect. 3 2
93 40.56 precipitation 0.1 90 < th dose dependent rect. 8 19
95 40.57 temperature 10.0 90 > th dose independent rect. 3 5
97 40.57 temperature 30.0 90 < th dose independent rect. 3 5
98 40.57 humidity 50.0 90 > th dose independent rect. 3 5
100 40.57 atmosphere 995.0 90 > th dose independent rect. 3 5
101 40.57 atmosphere 1015.0 90 < th dose independent rect. 3 5
104 40.57 temperature 10.0 90 > th dose independent rect. 8 19
112 40.61 precipitation 0.1 90 < th dose independent rect. 8 6
114 40.61 precipitation 0.1 90 < th dose dependent rect. 8 6
119 40.63 temperature 10.0 10 > th dose dependent rect. 4 5
123 40.64 temperature 10.0 90 > th dose independent rect. 8 6
126 40.64 atmosphere 995.0 90 > th dose independent rect. 8 6
128 40.64 atmosphere 1015.0 90 < th dose independent rect. 8 6
133 40.64 wind 9.0 90 < th dose independent rect. 8 19
134 40.64 atmosphere 995.0 90 > th dose independent rect. 8 19
135 40.64 temperature 10.0 90 > th dose dependent rect. 3 5
145 40.68 precipitation 0.1 270 < th dose independent rect. 3 14
147 40.68 precipitation 0.1 270 < th dose dependent rect. 3 14
148 40.69 radiation 40.0 90 < th dose independent rect. 3 5
149 40.69 precipitation 0.1 10 < th dose independent rect. 4 5
151 40.69 precipitation 0.1 10 < th dose dependent rect. 4 5
154 40.71 wind 9.0 10 < th dose independent rect. 9 6
155 40.71 temperature 10.0 1440 > th dose independent rect. 10 6
158 40.71 temperature 10.0 1440 > th dose independent rect. 16 18
172 40.75 wind 9.0 270 < th dose dependent rect. 3 2
175 40.76 wind 9.0 90 < th dose independent rect. 8 7
177 40.77 temperature 10.0 10 > th dose independent rect. 4 5
179 40.77 temperature 30.0 10 < th dose independent rect. 4 5
180 40.77 humidity 50.0 10 > th dose independent rect. 4 5
182 40.77 atmosphere 995.0 10 > th dose independent rect. 4 5
183 40.77 atmosphere 1015.0 10 < th dose independent rect. 4 5
185 40.77 temperature 10.0 10 > th dose independent rect. 9 19
188 40.78 humidity 50.0 90 > th dose independent rect. 8 19
191 40.79 humidity 50.0 90 > th dose independent rect. 8 6
192 40.79 wind 9.0 10 < th dose independent rect. 15 18
202 40.81 atmosphere 995.0 10 > th dose independent rect. 9 19
217 40.84 humidity 90.0 10 < th dose independent rect. 14 19
220 40.85 humidity 50.0 10 > th dose independent rect. 9 6
225 40.86 temperature 15.0 270 > th dose independent rect. 3 14
226 40.86 wind 9.0 10 < th dose independent rect. 9 19
243 40.89 temperature 10.0 270 > th dose independent rect. 3 2
245 40.89 temperature 30.0 270 < th dose independent rect. 3 2
246 40.89 humidity 50.0 270 > th dose independent rect. 3 2
249 40.89 atmosphere 995.0 270 > th dose independent rect. 3 2
250 40.89 atmosphere 1010.0 270 < th dose independent rect. 3 2
252 40.89 radiation 20.0 270 < th dose independent rect. 3 2
255 40.89 temperature 10.0 270 > th dose independent rect. 5 22
261 40.90 wind 9.0 270 < th dose independent rect. 5 22
269 40.91 radiation 30.0 270 < th dose dependent rect. 3 2
271 40.92 humidity 50.0 270 > th dose independent rect. 9 1
272 40.92 radiation 1.0 30 > th dose dependent rect. 15 17
273 40.93 radiation 1.0 270 < th dose dependent rect. 3 2
283 40.95 atmosphere 995.0 10 > th dose independent rect. 15 18
289 40.97 radiation 1.0 270 < th dose independent rect. 3 2
299 40.97 atmosphere 1015.0 10 < th dose independent rect. 15 18
308 40.99 temperature 10.0 270 > th dose independent rect. 9 1
309 40.99 atmosphere 995.0 270 > th dose independent rect. 9 1
310 40.99 atmosphere 1015.0 270 < th dose independent rect. 9 1
325 40.99 temperature 10.0 270 > th dose independent rect. 10 23
330 41.00 wind 9.0 270 < th dose independent rect. 9 1
346 41.02 precipitation 0.1 270 < th dose independent rect. 9 1
359 41.02 precipitation 0.1 270 < th dose dependent rect. 9 1
365 41.03 precipitation 0.1 10 < th dose independent rect. 9 19
366 41.03 precipitation 0.1 10 < th dose dependent rect. 9 19
389 41.09 wind 9.0 270 < th dose independent rect. 17 10
418 41.11 temperature 10.0 270 > th dose independent rect. 17 10
419 41.11 radiation 20.0 270 < th dose independent rect. 17 10
423 41.11 atmosphere 1015.0 270 < th dose independent rect. 3 14
439 41.14 wind 1.0 270 > th dose independent rect. 9 1
456 41.15 radiation 40.0 270 < th dose dependent rect. 17 10
457 41.15 radiation 1.0 90 > th dose dependent rect. 18 13
479 41.18 wind 5.0 270 < th dose independent rect. 23 8
483 41.18 temperature 10.0 270 > th dose dependent rect. 9 1
503 41.19 temperature 10.0 10 > th dose dependent rect. 9 6
508 41.20 radiation 1.0 90 > th dose independent rect. 18 14
513 41.21 temperature 10.0 90 > th dose dependent rect. 8 6
515 41.22 radiation 1.0 90 > th dose independent sin 12 NA
520 41.22 precipitation 0.1 270 < th dose independent rect. 10 23
523 41.22 precipitation 0.1 270 < th dose dependent rect. 10 23
526 41.23 precipitation 0.1 270 < th dose independent rect. 5 22
528 41.23 precipitation 0.1 270 < th dose dependent rect. 5 22
543 41.24 radiation 1.0 90 > th dose dependent rect. 4 3
566 41.27 wind 1.0 270 > th dose independent rect. 3 2
584 41.28 atmosphere 995.0 270 > th dose independent rect. 17 10
645 41.35 wind 9.0 270 < th dose dependent rect. 8 2
648 41.36 radiation 40.0 10 < th dose independent rect. 4 5
666 41.38 radiation 40.0 10 < th dose independent rect. 12 21
692 41.40 radiation 1.0 90 > th dose independent rect. 4 4
728 41.41 radiation 10.0 30 < th dose dependent sin 12 NA
729 41.41 humidity 50.0 270 > th dose dependent rect. 3 2
734 41.42 atmosphere 995.0 270 > th dose independent rect. 5 22
744 41.44 humidity 50.0 270 > th dose independent rect. 17 10
772 41.47 humidity 50.0 10 > th dose independent rect. 15 18
774 41.47 atmosphere 995.0 90 > th dose dependent rect. 8 19
808 41.51 radiation 1.0 270 > th dose independent rect. 9 1
835 41.53 wind 9.0 270 < th dose dependent rect. 7 6
850 41.55 wind 9.0 270 < th dose independent rect. 3 14
854 41.55 atmosphere 995.0 10 > th dose dependent rect. 9 19
879 41.59 radiation 40.0 90 < th dose independent rect. 4 15
910 41.62 temperature 10.0 1440 > th dose independent rect. 4 6
914 41.62 atmosphere 995.0 1440 > th dose independent rect. 4 6
915 41.62 atmosphere 1015.0 1440 < th dose independent rect. 4 6
926 41.62 temperature 10.0 1440 > th dose independent rect. 10 18
945 41.63 atmosphere 1015.0 90 < th dose independent rect. 8 19
989 41.65 wind 1.0 90 > th dose independent rect. 8 19