Os06g0129400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major facilitator superfamily protein.
FiT-DB / Search/ Help/ Sample detail
|
Os06g0129400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Major facilitator superfamily protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 265.96 | 0.766 | 3.81 | -1.56 | 0.888 | -2.55 | -2.26 | 7.31 | -0.228 | 9.6 | 19.56 | 695 | 2.08 | -- |
| 299.89 | 0.807 | 3.99 | -3.12 | 1.41 | -2.89 | -1.25 | -- | -0.699 | 9.4 | 16.12 | 702 | 2.22 | -- |
| 283.64 | 0.784 | 3.81 | -1.65 | 0.814 | -2.55 | -- | 6.87 | -0.22 | 9.41 | 19.81 | 754 | 2.44 | -- |
| 304.55 | 0.813 | 3.97 | -3.15 | 1.42 | -2.9 | -- | -- | -0.674 | 9.56 | 16.1 | 691 | 2.04 | -- |
| 293.24 | 0.798 | 3.78 | -1.29 | -- | -2.01 | -- | 6.27 | -0.12 | -- | 19.42 | 1232 | 2.78 | -- |
| 405.98 | 0.945 | 4.12 | -3.75 | 0.169 | -- | -1.61 | -- | -1.2 | 8.91 | -- | -- | -- | -- |
| 414.66 | 0.954 | 4.12 | -3.81 | 0.187 | -- | -- | -- | -1.2 | 7.78 | -- | -- | -- | -- |
| 321.02 | 0.834 | 3.94 | -2.32 | -- | -2.28 | -- | -- | -0.36 | -- | 15.58 | 11018 | 3.23 | -- |
| 537.02 | 1.08 | 3.83 | -- | 2.02 | -4.7 | -- | -- | -0.121 | 9.78 | 14.5 | 849 | 2.9 | -- |
| 416.56 | 0.954 | 4.12 | -3.81 | -- | -- | -- | -- | -1.2 | -- | -- | -- | -- | -- |
| 797.49 | 1.32 | 4.02 | -- | 0.174 | -- | -- | -- | -0.774 | 9.36 | -- | -- | -- | -- |
| 331.75 | 0.848 | 3.8 | -- | -- | -3.46 | -- | -- | 0.244 | -- | 3.617 | 47520 | 4.77 | -- |
| 799.25 | 1.32 | 4.03 | -- | -- | -- | -- | -- | -0.773 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 260.18 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 8 | 267.14 | temperature | 20 | 720 | > th | dose dependent | sin | 8 | NA |
| 13 | 268.67 | radiation | 40 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 15 | 269.01 | radiation | 40 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 17 | 269.28 | radiation | 40 | 14400 | < th | dose independent | rect. | 1 | 7 |
| 25 | 269.62 | temperature | 15 | 43200 | > th | dose independent | rect. | 3 | 1 |
| 26 | 269.68 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 5 |
| 29 | 269.73 | humidity | 90 | 43200 | > th | dose dependent | rect. | 5 | 2 |
| 33 | 269.89 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 13 |
| 34 | 269.97 | humidity | 90 | 43200 | > th | dose dependent | rect. | 4 | 4 |
| 41 | 270.29 | temperature | 15 | 43200 | < th | dose independent | rect. | 2 | 2 |
| 44 | 270.34 | temperature | 15 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 47 | 270.38 | temperature | 15 | 43200 | < th | dose dependent | rect. | 1 | 3 |
| 73 | 270.80 | humidity | 90 | 43200 | > th | dose dependent | sin | 3 | NA |
| 133 | 272.09 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 140 | 272.20 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 169 | 272.83 | radiation | 1 | 43200 | < th | dose dependent | rect. | 9 | 3 |
| 188 | 273.15 | temperature | 15 | 43200 | > th | dose independent | rect. | 24 | 12 |
| 197 | 273.27 | humidity | 90 | 43200 | > th | dose independent | sin | 4 | NA |
| 207 | 273.39 | radiation | 1 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 208 | 273.39 | radiation | 1 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 213 | 273.47 | radiation | 1 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 215 | 273.48 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 2 |
| 218 | 273.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 224 | 273.63 | radiation | 1 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 245 | 273.94 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 8 |
| 251 | 273.99 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 268 | 274.15 | humidity | 90 | 43200 | > th | dose independent | rect. | 2 | 11 |
| 284 | 274.32 | temperature | 15 | 43200 | > th | dose independent | sin | 8 | NA |
| 330 | 274.80 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 344 | 274.95 | temperature | 15 | 43200 | < th | dose independent | rect. | 24 | 12 |
| 357 | 275.01 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 15 | 7 |
| 370 | 275.12 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 19 |
| 378 | 275.19 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 396 | 275.39 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 16 |
| 432 | 275.62 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 493 | 276.01 | radiation | 20 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 508 | 276.03 | temperature | 15 | 43200 | < th | dose independent | sin | 8 | NA |
| 532 | 276.08 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 542 | 276.14 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 548 | 276.17 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 23 |
| 570 | 276.32 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 575 | 276.37 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 632 | 276.72 | humidity | 90 | 43200 | > th | dose dependent | no | NA | NA |
| 648 | 276.78 | humidity | 90 | 43200 | > th | dose dependent | rect. | 15 | 23 |
| 705 | 277.05 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 706 | 277.05 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 718 | 277.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 736 | 277.19 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 12 |
| 755 | 277.29 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 6 |
| 756 | 277.29 | humidity | 90 | 43200 | > th | dose independent | rect. | 5 | 23 |
| 771 | 277.40 | humidity | 90 | 43200 | > th | dose independent | rect. | 3 | 23 |
| 794 | 277.53 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 10 |
| 836 | 277.73 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 852 | 277.84 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 14 | 2 |
| 873 | 277.95 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 9 |
| 886 | 278.01 | humidity | 90 | 43200 | > th | dose independent | no | NA | NA |
| 892 | 278.03 | humidity | 90 | 43200 | > th | dose independent | rect. | 15 | 23 |
| 936 | 278.24 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 15 |
| 941 | 278.27 | radiation | 1 | 43200 | < th | dose dependent | rect. | 18 | 17 |
| 965 | 278.40 | temperature | 15 | 43200 | > th | dose independent | rect. | 10 | 20 |